Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127848535-127961761

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96263 10 127849889 to 127849901 12 + TSS region transcription start site region 96263
Tssr96264 10 127849903 to 127849914 11 + TSS region transcription start site region 96264
Tssr96265 10 127849917 to 127849926 9 + TSS region transcription start site region 96265
Rdh19 10 127849928 to 127861176 11248 + protein coding gene retinol dehydrogenase 19
Tssr96266 10 127850003 to 127850021 18 + TSS region transcription start site region 96266
Tssr96267 10 127850031 to 127850040 9 + TSS region transcription start site region 96267
Tssr3396 10 127850053 to 127850059 6 + TSS region transcription start site region 3396
Tssr96268 10 127866412 to 127866417 5 + TSS region transcription start site region 96268
Tssr96269 10 127866442 to 127866455 13 + TSS region transcription start site region 96269
Tssr96270 10 127866457 to 127866496 39 + TSS region transcription start site region 96270
Rdh16f2 10 127866476 to 127877319 10843 + protein coding gene RDH16 family member 2
Tssr96271 10 127866498 to 127866507 9 + TSS region transcription start site region 96271
Tssr96272 10 127866525 to 127866538 13 + TSS region transcription start site region 96272
Gm31091 10 127875757 to 127878525 2768 - lncRNA gene predicted gene, 31091
Tssr3397 10 127878315 to 127878343 28 - TSS region transcription start site region 3397
Tssr96273 10 127879313 to 127879324 11 + TSS region transcription start site region 96273
Rdh7 10 127884028 to 127888817 4789 - protein coding gene retinol dehydrogenase 7
Tssr99824 10 127884347 to 127884351 4 - TSS region transcription start site region 99824
Tssr99825 10 127885231 to 127885234 3 - TSS region transcription start site region 99825
Tssr99826 10 127888644 to 127888662 18 - TSS region transcription start site region 99826
Tssr99827 10 127888688 to 127888750 62 - TSS region transcription start site region 99827
Tssr96274 10 127893968 to 127893984 16 + TSS region transcription start site region 96274
Tssr96275 10 127898515 to 127898532 17 + TSS region transcription start site region 96275
Sdr9c7 10 127898535 to 127911761 13226 + protein coding gene 4short chain dehydrogenase/reductase family 9C, member 7
Tssr96276 10 127898538 to 127898549 11 + TSS region transcription start site region 96276
Tssr96277 10 127898550 to 127898555 5 + TSS region transcription start site region 96277
Tssr96278 10 127901959 to 127901980 21 + TSS region transcription start site region 96278
Tssr96279 10 127902000 to 127902034 34 + TSS region transcription start site region 96279
Tssr96280 10 127902041 to 127902056 15 + TSS region transcription start site region 96280
Opfaq7 10 127910449 to 129630506 1720057 QTL open field activity QTL 7
Gm40804 10 127913517 to 127925501 11984 - lncRNA gene predicted gene, 40804
Gm15905 10 127921069 to 127921366 297 + pseudogene predicted gene 15905
Gm40805 10 127935541 to 127952515 16974 - lncRNA gene predicted gene, 40805
Cpgi2378 10 127936656 to 127936926 270 CpG island CpG island 2378
Gm15900 10 127948219 to 127948560 341 - pseudogene predicted gene 15900
Gm23996 10 127953045 to 127953175 130 - snoRNA gene predicted gene, 23996
Gm40806 10 127961446 to 127971088 9642 - lncRNA gene predicted gene, 40806
Tssr96281 10 127961525 to 127961549 24 + TSS region transcription start site region 96281
Gm47949 10 127961556 to 127961929 373 + pseudogene predicted gene, 47949