Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127518161-127641148

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shmt2 10 127517123 to 127522444 5321 - protein coding gene serine hydroxymethyltransferase 2 (mitochondrial)
Tssr99780 10 127518922 to 127518935 13 - TSS region transcription start site region 99780
Tssr99781 10 127520776 to 127520784 8 - TSS region transcription start site region 99781
Tssr99782 10 127521124 to 127521134 10 - TSS region transcription start site region 99782
Cpgi2363 10 127521928 to 127522461 533 CpG island CpG island 2363
Tssr99783 10 127522339 to 127522356 17 - TSS region transcription start site region 99783
Tssr99784 10 127522364 to 127522423 59 - TSS region transcription start site region 99784
Tssr99785 10 127522428 to 127522454 26 - TSS region transcription start site region 99785
Cpgi2364 10 127524841 to 127525180 339 CpG island CpG island 2364
Nxph4 10 127525473 to 127534559 9086 - protein coding gene neurexophilin 4
Cpgi2365 10 127525829 to 127527016 1187 CpG island CpG island 2365
Tssr99786 10 127525846 to 127525860 14 - TSS region transcription start site region 99786
Tssr99787 10 127531522 to 127531533 11 - TSS region transcription start site region 99787
Cpgi2366 10 127533657 to 127535470 1813 CpG island CpG island 2366
Tssr99788 10 127534540 to 127534566 26 - TSS region transcription start site region 99788
Tssr99789 10 127534570 to 127534594 24 - TSS region transcription start site region 99789
Lrp1 10 127538161 to 127621148 82987 - protein coding gene low density lipoprotein receptor-related protein 1
Tssr99790 10 127539371 to 127539378 7 - TSS region transcription start site region 99790
Tssr99791 10 127563813 to 127563821 8 - TSS region transcription start site region 99791
Tssr99792 10 127563876 to 127563883 7 - TSS region transcription start site region 99792
Cpgi2367 10 127566569 to 127566912 343 CpG island CpG island 2367
Tssr99793 10 127589606 to 127589614 8 - TSS region transcription start site region 99793
Tssr99794 10 127594388 to 127594438 50 - TSS region transcription start site region 99794
Tssr99795 10 127594559 to 127594591 32 - TSS region transcription start site region 99795
Tssr99796 10 127595431 to 127595445 14 - TSS region transcription start site region 99796
Tssr99797 10 127595505 to 127595531 26 - TSS region transcription start site region 99797
Tssr99798 10 127595575 to 127595586 11 - TSS region transcription start site region 99798
Tssr96226 10 127596210 to 127596248 38 + TSS region transcription start site region 96226
Gm16217 10 127596548 to 127597870 1322 + antisense lncRNA gene predicted gene 16217
Tssr99799 10 127607118 to 127607164 46 - TSS region transcription start site region 99799
Tssr99800 10 127609839 to 127609846 7 - TSS region transcription start site region 99800
Tssr99801 10 127620668 to 127620717 49 - TSS region transcription start site region 99801
Tssr99802 10 127620942 to 127620943 1 - TSS region transcription start site region 99802
Tssr99803 10 127620960 to 127621031 71 - TSS region transcription start site region 99803
Tssr99804 10 127621107 to 127621166 59 - TSS region transcription start site region 99804
Tssr99805 10 127621242 to 127621258 16 - TSS region transcription start site region 99805
Cpgi2368 10 127621294 to 127622282 988 CpG island CpG island 2368
Tssr96227 10 127621298 to 127621323 25 + TSS region transcription start site region 96227
Tssr99806 10 127621651 to 127621682 31 - TSS region transcription start site region 99806
Tssr96228 10 127621780 to 127621801 21 + TSS region transcription start site region 96228
Gm40802 10 127634677 to 127641204 6527 + lncRNA gene predicted gene, 40802
Tssr96229 10 127634695 to 127634708 13 + TSS region transcription start site region 96229
Gm48815 10 127635913 to 127636387 474 - pseudogene predicted gene, 48815