Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127170378-127215728

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
B4galnt1 10 127165225 to 127172330 7105 + protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 1
Cpgi2340 10 127170002 to 127171344 1342 CpG island CpG island 2340
Tssr96164 10 127170945 to 127170948 3 + TSS region transcription start site region 96164
Tssr96165 10 127172032 to 127172046 14 + TSS region transcription start site region 96165
Slc26a10 10 127172313 to 127180726 8413 - protein coding gene solute carrier family 26, member 10
Tssr99727 10 127177000 to 127177030 30 - TSS region transcription start site region 99727
Cpgi2341 10 127177665 to 127179063 1398 CpG island CpG island 2341
Tssr99728 10 127179095 to 127179097 2 - TSS region transcription start site region 99728
Cpgi2342 10 127180152 to 127180559 407 CpG island CpG island 2342
Tssr99729 10 127180579 to 127180583 4 - TSS region transcription start site region 99729
Tssr96166 10 127181808 to 127181837 29 + TSS region transcription start site region 96166
Tssr96167 10 127181844 to 127181855 11 + TSS region transcription start site region 96167
Tssr96168 10 127181912 to 127181922 10 + TSS region transcription start site region 96168
Arhgef25 10 127182525 to 127190083 7558 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 25
Tssr96169 10 127187778 to 127187790 12 + TSS region transcription start site region 96169
Cpgi2343 10 127188207 to 127189624 1417 CpG island CpG island 2343
Tssr99730 10 127188731 to 127188763 32 - TSS region transcription start site region 99730
Tssr99731 10 127188776 to 127188806 30 - TSS region transcription start site region 99731
Tssr99732 10 127188828 to 127188837 9 - TSS region transcription start site region 99732
Cpgi2344 10 127189837 to 127190160 323 CpG island CpG island 2344
Tssr99733 10 127189981 to 127190071 90 - TSS region transcription start site region 99733
Dtx3 10 127190378 to 127195728 5350 - protein coding gene deltex 3, E3 ubiquitin ligase
Tssr99734 10 127191544 to 127191556 12 - TSS region transcription start site region 99734
Tssr99735 10 127193133 to 127193160 27 - TSS region transcription start site region 99735
Cpgi2345 10 127195131 to 127195767 636 CpG island CpG island 2345
Tssr99736 10 127195198 to 127195222 24 - TSS region transcription start site region 99736
Tssr96170 10 127195240 to 127195298 58 + TSS region transcription start site region 96170
F420014N23Rik 10 127195249 to 127202643 7394 + lincRNA gene RIKEN cDNA F420014N23 gene
Tssr99737 10 127195713 to 127195739 26 - TSS region transcription start site region 99737
Pip4k2c 10 127197067 to 127211585 14518 - protein coding gene phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
Cpgi2346 10 127210982 to 127211886 904 CpG island CpG island 2346
Tssr99738 10 127211528 to 127211626 98 - TSS region transcription start site region 99738