Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:126990356-127071002

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctdsp2 10 126978717 to 126999975 21258 + protein coding gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
Mir26a-2 10 126995530 to 126995613 83 + miRNA gene microRNA 26a-2
Tssr96102 10 126997397 to 126997416 19 + TSS region transcription start site region 96102
Tssr96103 10 126997511 to 126997524 13 + TSS region transcription start site region 96103
Mir546 10 126998440 to 126998560 120 + miRNA gene microRNA 546
Tssr96104 10 126998937 to 126998952 15 + TSS region transcription start site region 96104
Avil 10 127000709 to 127020994 20285 + protein coding gene advillin
Tssr96105 10 127000732 to 127000747 15 + TSS region transcription start site region 96105
Cpgi2327 10 127009673 to 127010175 502 CpG island CpG island 2327
Cpgi2328 10 127018443 to 127018665 222 CpG island CpG island 2328
Tsfm 10 127022332 to 127030814 8482 - protein coding gene Ts translation elongation factor, mitochondrial
Cpgi2329 10 127030356 to 127031002 646 CpG island CpG island 2329
Tssr99703 10 127030789 to 127030812 23 - TSS region transcription start site region 99703
Tssr99704 10 127030813 to 127030838 25 - TSS region transcription start site region 99704
Eef1akmt3 10 127032806 to 127042026 9220 - protein coding gene EEF1A lysine methyltransferase 3
Cpgi2330 10 127040823 to 127042270 1447 CpG island CpG island 2330
Mettl1 10 127041643 to 127046365 4722 + protein coding gene methyltransferase like 1
Tssr96106 10 127041931 to 127041972 41 + TSS region transcription start site region 96106
Tssr96107 10 127048235 to 127048246 11 + TSS region transcription start site region 96107
Cyp27b1 10 127048250 to 127053006 4756 + protein coding gene cytochrome P450, family 27, subfamily b, polypeptide 1
Cpgi2331 10 127048950 to 127050272 1322 CpG island CpG island 2331
March9 10 127056050 to 127060184 4134 - protein coding gene membrane-associated ring finger (C3HC4) 9
Cpgi2332 10 127059150 to 127060808 1658 CpG island CpG island 2332
Tssr96108 10 127059358 to 127059371 13 + TSS region transcription start site region 96108
Tssr99705 10 127060135 to 127060148 13 - TSS region transcription start site region 99705
Tssr99706 10 127060163 to 127060206 43 - TSS region transcription start site region 99706
Tssr99707 10 127060258 to 127060306 48 - TSS region transcription start site region 99707
Tssr99708 10 127060338 to 127060387 49 - TSS region transcription start site region 99708
Cpgi2333 10 127063241 to 127064393 1152 CpG island CpG island 2333
Tssr96109 10 127063527 to 127063538 11 + TSS region transcription start site region 96109
Cdk4 10 127063535 to 127067288 3753 + protein coding gene cyclin-dependent kinase 4
Tssr96110 10 127063548 to 127063597 49 + TSS region transcription start site region 96110
Tssr96111 10 127063599 to 127063655 56 + TSS region transcription start site region 96111
Tssr96112 10 127063656 to 127063670 14 + TSS region transcription start site region 96112
Tssr96113 10 127064206 to 127064244 38 + TSS region transcription start site region 96113
Tssr96114 10 127064286 to 127064310 24 + TSS region transcription start site region 96114
Tssr96115 10 127066154 to 127066182 28 + TSS region transcription start site region 96115
Tssr96116 10 127067086 to 127067107 21 + TSS region transcription start site region 96116
Tssr96117 10 127067168 to 127067181 13 + TSS region transcription start site region 96117
Tspan31 10 127067290 to 127070261 2971 - protein coding gene tetraspanin 31
Tssr99709 10 127067517 to 127067538 21 - TSS region transcription start site region 99709
Tssr99710 10 127067632 to 127067660 28 - TSS region transcription start site region 99710
Tssr99711 10 127067732 to 127067760 28 - TSS region transcription start site region 99711
Tssr99712 10 127067826 to 127067842 16 - TSS region transcription start site region 99712
Tssr99713 10 127069096 to 127069109 13 - TSS region transcription start site region 99713
Cpgi2334 10 127070118 to 127071073 955 CpG island CpG island 2334
Tssr99714 10 127070232 to 127070249 17 - TSS region transcription start site region 99714
Tssr99715 10 127070254 to 127070302 48 - TSS region transcription start site region 99715
Tssr96118 10 127070374 to 127070421 47 + TSS region transcription start site region 96118
A730063M14Rik 10 127070481 to 127071101 620 + lincRNA gene RIKEN cDNA A730063M14 gene