MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:126720375-126960501

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D10Mit1002	10	126774619 to 126774742	123		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 1002
4930484H19Rik	10	126788864 to 126793710	4846	-	lincRNA gene	RIKEN cDNA 4930484H19 gene
Gm9111	10	126809592 to 126810300	708	-	pseudogene	predicted gene 9111
Cpgi2319	10	126809740 to 126810215	475		CpG island	CpG island 2319
Gm24179	10	126840375 to 126840501	126	-	snoRNA gene	predicted gene, 24179
Cpgi2320	10	126863299 to 126863550	251		CpG island	CpG island 2320
Atp23	10	126868427 to 126901355	32928	-	protein coding gene	ATP23 metallopeptidase and ATP synthase assembly factor homolog
Gm6333	10	126893113 to 126893908	795	+	pseudogene	predicted gene 6333
Cpgi2321	10	126900845 to 126901548	703		CpG island	CpG island 2321
Tssr99697	10	126901315 to 126901396	81	-	TSS region	transcription start site region 99697
Cpgi2322	10	126905764 to 126906101	337		CpG island	CpG island 2322
Tssr99698	10	126905944 to 126905963	19	-	TSS region	transcription start site region 99698
Tssr99699	10	126905964 to 126905980	16	-	TSS region	transcription start site region 99699
Cpgi2323	10	126928146 to 126928728	582		CpG island	CpG island 2323
Tssr96097	10	126928468 to 126928483	15	+	TSS region	transcription start site region 96097
Gm30456	10	126934208 to 126935199	991	-	lncRNA gene	predicted gene, 30456
Cpgi2324	10	126957534 to 126958054	520		CpG island	CpG island 2324
Gm30539	10	126957676 to 126978799	21123	+	lncRNA gene	predicted gene, 30539
Gm49335	10	126958023 to 126960997	2974	+	lincRNA gene	predicted gene, 49335