Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:125781970-126961998

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opfaq10 10 125797802 to 129630506 3832704 QTL open field activity QTL 10
Gm29944 10 125907398 to 125938614 31216 - lncRNA gene predicted gene, 29944
Cpgi2316 10 125965683 to 125967137 1454 CpG island CpG island 2316
Tssr96093 10 125966189 to 125966207 18 + TSS region transcription start site region 96093
Tssr96094 10 125966214 to 125966272 58 + TSS region transcription start site region 96094
Lrig3 10 125966219 to 126015359 49140 + protein coding gene leucine-rich repeats and immunoglobulin-like domains 3
Tssr96095 10 125972380 to 125972385 5 + TSS region transcription start site region 96095
Gm29997 10 125979853 to 125986204 6351 + lncRNA gene predicted gene, 29997
D10Mit270 10 125986128 to 125986235 107 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 270
Gm22183 10 126036827 to 126036899 72 + miRNA gene predicted gene, 22183
Gm30041 10 126094123 to 126138321 44198 + lncRNA gene predicted gene, 30041
Cpgi2317 10 126168704 to 126168870 166 CpG island CpG island 2317
Gm4510 10 126185897 to 126186323 426 - pseudogene predicted gene 4510
1700021G15Rik 10 126255117 to 126257218 2101 + lincRNA gene RIKEN cDNA 1700021G15 gene
Cpgi2318 10 126330598 to 126330821 223 CpG island CpG island 2318
1700025K04Rik 10 126371838 to 126374329 2491 + lincRNA gene RIKEN cDNA 1700025K04 gene
Tssr96096 10 126371970 to 126371998 28 + TSS region transcription start site region 96096
Tssr3391 10 126573069 to 126573073 4 - TSS region transcription start site region 3391
Gm47965 10 126586690 to 126586804 114 - pseudogene predicted gene, 47965
Gm40797 10 126663998 to 126674452 10454 + lincRNA gene predicted gene, 40797
Tssr99696 10 126692525 to 126692539 14 - TSS region transcription start site region 99696
4930456K20Rik 10 126693433 to 126694536 1103 unclassified gene RIKEN cDNA 4930456K20 gene
Mir378d 10 126710282 to 126710391 109 - miRNA gene microRNA 378d
Gm47966 10 126714005 to 126719394 5389 - lincRNA gene predicted gene, 47966
D10Mit1002 10 126774619 to 126774742 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 1002
4930484H19Rik 10 126788864 to 126793710 4846 - lincRNA gene RIKEN cDNA 4930484H19 gene
Gm9111 10 126809592 to 126810300 708 - pseudogene predicted gene 9111
Cpgi2319 10 126809740 to 126810215 475 CpG island CpG island 2319
Gm24179 10 126840375 to 126840501 126 - snoRNA gene predicted gene, 24179
Cpgi2320 10 126863299 to 126863550 251 CpG island CpG island 2320
Atp23 10 126868427 to 126901355 32928 - protein coding gene ATP23 metallopeptidase and ATP synthase assembly factor homolog
Gm6333 10 126893113 to 126893908 795 + pseudogene predicted gene 6333
Cpgi2321 10 126900845 to 126901548 703 CpG island CpG island 2321
Tssr99697 10 126901315 to 126901396 81 - TSS region transcription start site region 99697
Cpgi2322 10 126905764 to 126906101 337 CpG island CpG island 2322
Tssr99698 10 126905944 to 126905963 19 - TSS region transcription start site region 99698
Tssr99699 10 126905964 to 126905980 16 - TSS region transcription start site region 99699
Cpgi2323 10 126928146 to 126928728 582 CpG island CpG island 2323
Tssr96097 10 126928468 to 126928483 15 + TSS region transcription start site region 96097
Gm30456 10 126934208 to 126935199 991 - lncRNA gene predicted gene, 30456
Cpgi2324 10 126957534 to 126958054 520 CpG island CpG island 2324
Gm30539 10 126957676 to 126978799 21123 + lncRNA gene predicted gene, 30539
Gm49335 10 126958023 to 126960997 2974 + lincRNA gene predicted gene, 49335