Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:125715598-126945821

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aggr1 10 119671003 to 125739363 6068360 QTL aggression 1
Cpgi2315 10 125731424 to 125731684 260 CpG island CpG island 2315
D10Mit103 10 125739225 to 125739363 138 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 103
Lmr25b 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25b
Ltpr5b 10 125739225 to 125739363 138 QTL Leishmania tropica response 5b
Lmr25 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25
Lmr25a 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25a
Ltpr5 10 125739363 to 90671039 -35068324 QTL Leishmania tropica response 5
Scc9 10 125739363 to 18383585 -107355778 QTL colon tumor susceptibility 9
Gm36884 10 125742504 to 125744819 2315 - lncRNA gene predicted gene, 36884
Gm40796 10 125747004 to 125752851 5847 + lncRNA gene predicted gene, 40796
Gm29862 10 125757040 to 125773965 16925 - lncRNA gene predicted gene, 29862
Opfaq10 10 125797802 to 129630506 3832704 QTL open field activity QTL 10
Gm29944 10 125907398 to 125938614 31216 - lncRNA gene predicted gene, 29944
Cpgi2316 10 125965683 to 125967137 1454 CpG island CpG island 2316
Tssr96093 10 125966189 to 125966207 18 + TSS region transcription start site region 96093
Tssr96094 10 125966214 to 125966272 58 + TSS region transcription start site region 96094
Lrig3 10 125966219 to 126015359 49140 + protein coding gene leucine-rich repeats and immunoglobulin-like domains 3
Tssr96095 10 125972380 to 125972385 5 + TSS region transcription start site region 96095
Gm29997 10 125979853 to 125986204 6351 + lncRNA gene predicted gene, 29997
D10Mit270 10 125986128 to 125986235 107 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 270
Gm22183 10 126036827 to 126036899 72 + miRNA gene predicted gene, 22183
Gm30041 10 126094123 to 126138321 44198 + lncRNA gene predicted gene, 30041
Cpgi2317 10 126168704 to 126168870 166 CpG island CpG island 2317
Gm4510 10 126185897 to 126186323 426 - pseudogene predicted gene 4510
1700021G15Rik 10 126255117 to 126257218 2101 + lincRNA gene RIKEN cDNA 1700021G15 gene
Cpgi2318 10 126330598 to 126330821 223 CpG island CpG island 2318
1700025K04Rik 10 126371838 to 126374329 2491 + lincRNA gene RIKEN cDNA 1700025K04 gene
Tssr96096 10 126371970 to 126371998 28 + TSS region transcription start site region 96096
Tssr3391 10 126573069 to 126573073 4 - TSS region transcription start site region 3391
Gm47965 10 126586690 to 126586804 114 - pseudogene predicted gene, 47965
Gm40797 10 126663998 to 126674452 10454 + lincRNA gene predicted gene, 40797
Tssr99696 10 126692525 to 126692539 14 - TSS region transcription start site region 99696
4930456K20Rik 10 126693433 to 126694536 1103 unclassified gene RIKEN cDNA 4930456K20 gene
Mir378d 10 126710282 to 126710391 109 - miRNA gene microRNA 378d
Gm47966 10 126714005 to 126719394 5389 - lincRNA gene predicted gene, 47966
D10Mit1002 10 126774619 to 126774742 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 1002
4930484H19Rik 10 126788864 to 126793710 4846 - lincRNA gene RIKEN cDNA 4930484H19 gene
Gm9111 10 126809592 to 126810300 708 - pseudogene predicted gene 9111
Cpgi2319 10 126809740 to 126810215 475 CpG island CpG island 2319
Gm24179 10 126840375 to 126840501 126 - snoRNA gene predicted gene, 24179
Cpgi2320 10 126863299 to 126863550 251 CpG island CpG island 2320
Atp23 10 126868427 to 126901355 32928 - protein coding gene ATP23 metallopeptidase and ATP synthase assembly factor homolog
Gm6333 10 126893113 to 126893908 795 + pseudogene predicted gene 6333
Cpgi2321 10 126900845 to 126901548 703 CpG island CpG island 2321
Tssr99697 10 126901315 to 126901396 81 - TSS region transcription start site region 99697
Cpgi2322 10 126905764 to 126906101 337 CpG island CpG island 2322
Tssr99698 10 126905944 to 126905963 19 - TSS region transcription start site region 99698
Tssr99699 10 126905964 to 126905980 16 - TSS region transcription start site region 99699
Cpgi2323 10 126928146 to 126928728 582 CpG island CpG island 2323
Tssr96097 10 126928468 to 126928483 15 + TSS region transcription start site region 96097
Gm30456 10 126934208 to 126935199 991 - lncRNA gene predicted gene, 30456