Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:125487380-126457385

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Homaq2 10 110617486 to 125680038 15062552 QTL homeostatic model assessment QTL 2
Insq12 10 110617486 to 125680038 15062552 QTL insulin QTL 12
Aggr1 10 119671003 to 125739363 6068360 QTL aggression 1
Gluq3 10 120407822 to 125680038 5272216 QTL blood glucose QTL 3
Pcholq2 10 120407822 to 125680038 5272216 QTL plasma cholesterol QTL 2
Tssr99695 10 125488393 to 125488430 37 - TSS region transcription start site region 99695
Gm9102 10 125512530 to 125512991 461 + pseudogene predicted gene 9102
Tssr96091 10 125549375 to 125549382 7 + TSS region transcription start site region 96091
Tssr96092 10 125551542 to 125551544 2 + TSS region transcription start site region 96092
Gm40795 10 125565048 to 125567460 2412 - lncRNA gene predicted gene, 40795
Gluq1 10 125680038 to 74151384 -51528654 QTL blood glucose QTL 1
Pcholq4 10 125680038 to 74151384 -51528654 QTL plasma cholesterol QTL 4
Ltgq2 10 125680038 to 125680038 0 QTL liver triglyceride QTL 2
Obrq9 10 125680038 to 125680038 0 QTL obesity resistance QTL 9
Cpgi2315 10 125731424 to 125731684 260 CpG island CpG island 2315
D10Mit103 10 125739225 to 125739363 138 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 103
Ltpr5b 10 125739225 to 125739363 138 QTL Leishmania tropica response 5b
Lmr25b 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25b
Lmr25 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25
Lmr25a 10 125739225 to 125739363 138 QTL leishmaniasis resistance 25a
Ltpr5 10 125739363 to 90671039 -35068324 QTL Leishmania tropica response 5
Scc9 10 125739363 to 18383585 -107355778 QTL colon tumor susceptibility 9
Gm36884 10 125742504 to 125744819 2315 - lncRNA gene predicted gene, 36884
Gm40796 10 125747004 to 125752851 5847 + lncRNA gene predicted gene, 40796
Gm29862 10 125757040 to 125773965 16925 - lncRNA gene predicted gene, 29862
Opfaq10 10 125797802 to 129630506 3832704 QTL open field activity QTL 10
Gm29944 10 125907398 to 125938614 31216 - lncRNA gene predicted gene, 29944
Cpgi2316 10 125965683 to 125967137 1454 CpG island CpG island 2316
Tssr96093 10 125966189 to 125966207 18 + TSS region transcription start site region 96093
Tssr96094 10 125966214 to 125966272 58 + TSS region transcription start site region 96094
Lrig3 10 125966219 to 126015359 49140 + protein coding gene leucine-rich repeats and immunoglobulin-like domains 3
Tssr96095 10 125972380 to 125972385 5 + TSS region transcription start site region 96095
Gm29997 10 125979853 to 125986204 6351 + lncRNA gene predicted gene, 29997
D10Mit270 10 125986128 to 125986235 107 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 270
Gm22183 10 126036827 to 126036899 72 + miRNA gene predicted gene, 22183
Gm30041 10 126094123 to 126138321 44198 + lncRNA gene predicted gene, 30041
Cpgi2317 10 126168704 to 126168870 166 CpG island CpG island 2317
Gm4510 10 126185897 to 126186323 426 - pseudogene predicted gene 4510
1700021G15Rik 10 126255117 to 126257218 2101 + lincRNA gene RIKEN cDNA 1700021G15 gene
Cpgi2318 10 126330598 to 126330821 223 CpG island CpG island 2318
1700025K04Rik 10 126371838 to 126374329 2491 + lincRNA gene RIKEN cDNA 1700025K04 gene
Tssr96096 10 126371970 to 126371998 28 + TSS region transcription start site region 96096