Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:122962560-124202563

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Recrq11 10 114500000 to 123800000 9300000 QTL recombination rate in male meiosis QTL 11
Tssr99655 10 122982343 to 122982346 3 - TSS region transcription start site region 99655
D630033A02Rik 10 122985074 to 122986555 1481 - unclassified gene RIKEN cDNA D630033A02 gene
Cpgi2309 10 122985239 to 122986757 1518 CpG island CpG island 2309
Tssr99656 10 122985636 to 122985642 6 - TSS region transcription start site region 99656
Mirlet7i 10 122985640 to 122985724 84 - miRNA gene microRNA let7i
Tssr99657 10 122986050 to 122986064 14 - TSS region transcription start site region 99657
Tssr99658 10 122986469 to 122986498 29 - TSS region transcription start site region 99658
Tssr96078 10 122986574 to 122986588 14 + TSS region transcription start site region 96078
Mon2 10 122992060 to 123076505 84445 - protein coding gene MON2 homolog, regulator of endosome to Golgi trafficking
D10Mit277 10 123015843 to 123015992 149 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-277
Cpgi2310 10 123075774 to 123076689 915 CpG island CpG island 2310
Tssr99659 10 123076367 to 123076391 24 - TSS region transcription start site region 99659
Usp15 10 123105006 to 123196995 91989 - protein coding gene ubiquitin specific peptidase 15
Tssr99660 10 123147293 to 123147302 9 - TSS region transcription start site region 99660
Tssr99661 10 123147306 to 123147335 29 - TSS region transcription start site region 99661
Tssr99662 10 123147342 to 123147360 18 - TSS region transcription start site region 99662
Tssr99663 10 123147365 to 123147377 12 - TSS region transcription start site region 99663
Tssr99664 10 123171787 to 123171838 51 - TSS region transcription start site region 99664
Gm47726 10 123178324 to 123178684 360 - pseudogene predicted gene, 47726
Cpgi2311 10 123196276 to 123197607 1331 CpG island CpG island 2311
Tssr99665 10 123196467 to 123196468 1 - TSS region transcription start site region 99665
Gm4129 10 123196695 to 123199418 2723 + bidirectional promoter lncRNA gene predicted gene 4129
Gm27920 10 123196876 to 123196971 95 - miRNA gene predicted gene, 27920
Tssr99666 10 123196916 to 123196961 45 - TSS region transcription start site region 99666
Tssr99667 10 123196972 to 123196975 3 - TSS region transcription start site region 99667
Tssr99668 10 123196976 to 123196987 11 - TSS region transcription start site region 99668
Gm36628 10 123207950 to 123211644 3694 - lncRNA gene predicted gene, 36628
Cpgi2312 10 123257806 to 123258070 264 CpG island CpG island 2312
Tafa2 10 123264002 to 123741204 477202 + protein coding gene TAFA chemokine like family member 2
Tssr3388 10 123264040 to 123264068 28 + TSS region transcription start site region 3388
Tssr96079 10 123264108 to 123264125 17 + TSS region transcription start site region 96079
Cpgi2313 10 123264421 to 123265884 1463 CpG island CpG island 2313
Tssr99669 10 123264684 to 123264712 28 - TSS region transcription start site region 99669
Tssr3389 10 123264975 to 123265001 26 + TSS region transcription start site region 3389
Tssr96080 10 123265031 to 123265053 22 + TSS region transcription start site region 96080
Tssr96081 10 123360180 to 123360192 12 + TSS region transcription start site region 96081
Tssr96082 10 123360766 to 123360805 39 + TSS region transcription start site region 96082
Tssr96083 10 123432565 to 123432570 5 + TSS region transcription start site region 96083
Gm22958 10 123432566 to 123432749 183 + snRNA gene predicted gene, 22958
Tssr96084 10 123434712 to 123434722 10 + TSS region transcription start site region 96084
Gm47801 10 123437500 to 123440600 3100 + unclassified gene predicted gene, 47801
Gm40794 10 123533857 to 123537534 3677 - lncRNA gene predicted gene, 40794
Tssr3390 10 123582560 to 123582563 3 + TSS region transcription start site region 3390
Gm19169 10 123583574 to 123584814 1240 + pseudogene predicted gene, 19169
Tssr96085 10 123634092 to 123634095 3 + TSS region transcription start site region 96085
Gm18510 10 123890803 to 123891898 1095 - pseudogene predicted gene, 18510