Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:122901276-123492607

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppm1h 10 122678762 to 122945795 267033 + protein coding gene protein phosphatase 1H (PP2C domain containing)
Tssr96076 10 122941975 to 122941979 4 + TSS region transcription start site region 96076
Tssr96077 10 122944723 to 122944727 4 + TSS region transcription start site region 96077
Frct3c 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3c
Frct3a 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3a
Frct3 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3
Cpgi2307 10 122960100 to 122960433 333 CpG island CpG island 2307
Cpgi2308 10 122960882 to 122961051 169 CpG island CpG island 2308
Tssr99655 10 122982343 to 122982346 3 - TSS region transcription start site region 99655
D630033A02Rik 10 122985074 to 122986555 1481 - unclassified gene RIKEN cDNA D630033A02 gene
Cpgi2309 10 122985239 to 122986757 1518 CpG island CpG island 2309
Tssr99656 10 122985636 to 122985642 6 - TSS region transcription start site region 99656
Mirlet7i 10 122985640 to 122985724 84 - miRNA gene microRNA let7i
Tssr99657 10 122986050 to 122986064 14 - TSS region transcription start site region 99657
Tssr99658 10 122986469 to 122986498 29 - TSS region transcription start site region 99658
Tssr96078 10 122986574 to 122986588 14 + TSS region transcription start site region 96078
Mon2 10 122992060 to 123076505 84445 - protein coding gene MON2 homolog, regulator of endosome to Golgi trafficking
D10Mit277 10 123015843 to 123015992 149 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-277
Cpgi2310 10 123075774 to 123076689 915 CpG island CpG island 2310
Tssr99659 10 123076367 to 123076391 24 - TSS region transcription start site region 99659
Usp15 10 123105006 to 123196995 91989 - protein coding gene ubiquitin specific peptidase 15
Tssr99660 10 123147293 to 123147302 9 - TSS region transcription start site region 99660
Tssr99661 10 123147306 to 123147335 29 - TSS region transcription start site region 99661
Tssr99662 10 123147342 to 123147360 18 - TSS region transcription start site region 99662
Tssr99663 10 123147365 to 123147377 12 - TSS region transcription start site region 99663
Tssr99664 10 123171787 to 123171838 51 - TSS region transcription start site region 99664
Gm47726 10 123178324 to 123178684 360 - pseudogene predicted gene, 47726
Cpgi2311 10 123196276 to 123197607 1331 CpG island CpG island 2311
Tssr99665 10 123196467 to 123196468 1 - TSS region transcription start site region 99665
Gm4129 10 123196695 to 123199418 2723 + bidirectional promoter lncRNA gene predicted gene 4129
Gm27920 10 123196876 to 123196971 95 - miRNA gene predicted gene, 27920
Tssr99666 10 123196916 to 123196961 45 - TSS region transcription start site region 99666
Tssr99667 10 123196972 to 123196975 3 - TSS region transcription start site region 99667
Tssr99668 10 123196976 to 123196987 11 - TSS region transcription start site region 99668
Gm36628 10 123207950 to 123211644 3694 - lncRNA gene predicted gene, 36628
Cpgi2312 10 123257806 to 123258070 264 CpG island CpG island 2312
Tafa2 10 123264002 to 123741204 477202 + protein coding gene TAFA chemokine like family member 2
Tssr3388 10 123264040 to 123264068 28 + TSS region transcription start site region 3388
Tssr96079 10 123264108 to 123264125 17 + TSS region transcription start site region 96079
Cpgi2313 10 123264421 to 123265884 1463 CpG island CpG island 2313
Tssr99669 10 123264684 to 123264712 28 - TSS region transcription start site region 99669
Tssr3389 10 123264975 to 123265001 26 + TSS region transcription start site region 3389
Tssr96080 10 123265031 to 123265053 22 + TSS region transcription start site region 96080
Tssr96081 10 123360180 to 123360192 12 + TSS region transcription start site region 96081
Tssr96082 10 123360766 to 123360805 39 + TSS region transcription start site region 96082
Tssr96083 10 123432565 to 123432570 5 + TSS region transcription start site region 96083
Gm22958 10 123432566 to 123432749 183 + snRNA gene predicted gene, 22958
Tssr96084 10 123434712 to 123434722 10 + TSS region transcription start site region 96084
Gm47801 10 123437500 to 123440600 3100 + unclassified gene predicted gene, 47801