Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:122697397-123017442

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppm1h 10 122678762 to 122945795 267033 + protein coding gene protein phosphatase 1H (PP2C domain containing)
Tssr96066 10 122725357 to 122725360 3 + TSS region transcription start site region 96066
A430028G04Rik 10 122756438 to 122758410 1972 - unclassified gene RIKEN cDNA A430028G04 gene
Tssr96067 10 122757132 to 122757181 49 + TSS region transcription start site region 96067
Gm47582 10 122777480 to 122778065 585 - unclassified gene predicted gene, 47582
Tssr96068 10 122782697 to 122782713 16 + TSS region transcription start site region 96068
Gm36208 10 122792055 to 122792483 428 - antisense lncRNA gene predicted gene, 36208
Tssr96069 10 122795164 to 122795167 3 + TSS region transcription start site region 96069
Cpgi2305 10 122800391 to 122800584 193 CpG island CpG island 2305
Cpgi2306 10 122802139 to 122802618 479 CpG island CpG island 2306
Tssr96070 10 122802200 to 122802221 21 + TSS region transcription start site region 96070
Tssr96071 10 122805550 to 122805552 2 + TSS region transcription start site region 96071
Tssr3387 10 122805894 to 122805940 46 + TSS region transcription start site region 3387
Tssr96072 10 122806075 to 122806079 4 + TSS region transcription start site region 96072
Tssr96073 10 122817970 to 122817987 17 + TSS region transcription start site region 96073
Tssr96074 10 122821175 to 122821179 4 + TSS region transcription start site region 96074
Tssr99654 10 122857397 to 122857442 45 - TSS region transcription start site region 99654
Tssr96075 10 122860367 to 122860408 41 + TSS region transcription start site region 96075
Tssr96076 10 122941975 to 122941979 4 + TSS region transcription start site region 96076
Tssr96077 10 122944723 to 122944727 4 + TSS region transcription start site region 96077
Frct3a 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3a
Frct3c 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3c
Frct3 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3
Cpgi2307 10 122960100 to 122960433 333 CpG island CpG island 2307
Cpgi2308 10 122960882 to 122961051 169 CpG island CpG island 2308
Tssr99655 10 122982343 to 122982346 3 - TSS region transcription start site region 99655
D630033A02Rik 10 122985074 to 122986555 1481 - unclassified gene RIKEN cDNA D630033A02 gene
Cpgi2309 10 122985239 to 122986757 1518 CpG island CpG island 2309
Tssr99656 10 122985636 to 122985642 6 - TSS region transcription start site region 99656
Mirlet7i 10 122985640 to 122985724 84 - miRNA gene microRNA let7i
Tssr99657 10 122986050 to 122986064 14 - TSS region transcription start site region 99657
Tssr99658 10 122986469 to 122986498 29 - TSS region transcription start site region 99658
Tssr96078 10 122986574 to 122986588 14 + TSS region transcription start site region 96078
Mon2 10 122992060 to 123076505 84445 - protein coding gene MON2 homolog, regulator of endosome to Golgi trafficking
D10Mit277 10 123015843 to 123015992 149 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-277