MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:122257334-122480088

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lmr5	10	116384730 to 122343923	5959193		QTL	leishmaniasis resistance 5
Tssr3385	10	122270979 to 122270981	2	+	TSS region	transcription start site region 3385
D10Mit25	10	122343808 to 122343923	115		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 25
Lmr5b	10	122343808 to 122343923	115		QTL	leishmaniasis resistance 5b
Lmr5d	10	122343808 to 122343923	115		QTL	leishmaniasis resistance 5d
Lmr5f	10	122343808 to 122343923	115		QTL	leishmaniasis resistance 5f
Gm40790	10	122357334 to 122380088	22754	-	lncRNA gene	predicted gene, 40790
Gm36041	10	122386892 to 122435033	48141	+	lincRNA gene	predicted gene, 36041
Tssr96049	10	122387003 to 122387016	13	+	TSS region	transcription start site region 96049
Gm48877	10	122405113 to 122546498	141385	-	antisense lncRNA gene	predicted gene, 48877
Tssr96050	10	122406389 to 122406390	1	+	TSS region	transcription start site region 96050
Cpgi2301	10	122448207 to 122449781	1574		CpG island	CpG island 2301
Avpr1a	10	122448499 to 122453452	4953	+	protein coding gene	arginine vasopressin receptor 1A
Tssr96051	10	122448531 to 122448550	19	+	TSS region	transcription start site region 96051
Tssr96052	10	122448551 to 122448575	24	+	TSS region	transcription start site region 96052
Tssr96053	10	122449386 to 122449395	9	+	TSS region	transcription start site region 96053
Gm48878	10	122454132 to 122456809	2677	+	unclassified gene	predicted gene, 48878
D10Mit238	10	122479287 to 122479400	113		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 238