Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:122092334-122645088

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmr5 10 116384730 to 122343923 5959193 QTL leishmaniasis resistance 5
Rxylt1 10 122081120 to 122097366 16246 - protein coding gene ribitol xylosyltransferase 1
Tssr99649 10 122096465 to 122096468 3 - TSS region transcription start site region 99649
Cpgi2300 10 122096519 to 122097866 1347 CpG island CpG island 2300
Tssr99650 10 122097042 to 122097073 31 - TSS region transcription start site region 99650
Tssr99651 10 122097078 to 122097196 118 - TSS region transcription start site region 99651
Gm4489 10 122119700 to 122130558 10858 + lincRNA gene predicted gene 4489
Gm9081 10 122169373 to 122170363 990 + pseudogene predicted gene 9081
Tssr96048 10 122198769 to 122198774 5 + TSS region transcription start site region 96048
Gm48875 10 122199150 to 122199498 348 + pseudogene predicted gene, 48875
Nociq2 10 122205399 to 122205623 224 QTL nociceptive sensitivity inflammatory QTL 2
Psds4 10 122205399 to 125047291 2841892 QTL psoriasis-like skin disease severity 4
D10Mit35a 10 122205399 to 122205623 224 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 35a
Nhdlq4 10 122205399 to 122205623 224 QTL non-HDL QTL 4
Sle12 10 122205399 to 122205623 224 QTL systematic lupus erythematosus susceptibility 12
Egq9 10 122205623 to 84243786 -37961837 QTL early growth QTL 9
Tesq3 10 122205623 to 84243786 -37961837 QTL testis weight QTL 3
W10q8 10 122205623 to 84243786 -37961837 QTL weight 10 weeks QTL 8
Lgaq5 10 122205623 to 84243786 -37961837 QTL late growth adjusted QTL 5
Estoq3 10 122205623 to 84243786 -37961837 QTL embryo survival total QTL 3
Espq3 10 122205623 to 84243786 -37961837 QTL embryo survival preimplantation QTL 3
W6q8 10 122205623 to 84243786 -37961837 QTL weight 6 weeks QTL 8
D10Mit35b 10 122217086 to 122217366 280 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 35b
Tssr3385 10 122270979 to 122270981 2 + TSS region transcription start site region 3385
Lmr5b 10 122343808 to 122343923 115 QTL leishmaniasis resistance 5b
D10Mit25 10 122343808 to 122343923 115 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 25
Lmr5f 10 122343808 to 122343923 115 QTL leishmaniasis resistance 5f
Lmr5d 10 122343808 to 122343923 115 QTL leishmaniasis resistance 5d
Gm40790 10 122357334 to 122380088 22754 - lncRNA gene predicted gene, 40790
Gm36041 10 122386892 to 122435033 48141 + lincRNA gene predicted gene, 36041
Tssr96049 10 122387003 to 122387016 13 + TSS region transcription start site region 96049
Gm48877 10 122405113 to 122546498 141385 - antisense lncRNA gene predicted gene, 48877
Tssr96050 10 122406389 to 122406390 1 + TSS region transcription start site region 96050
Cpgi2301 10 122448207 to 122449781 1574 CpG island CpG island 2301
Avpr1a 10 122448499 to 122453452 4953 + protein coding gene arginine vasopressin receptor 1A
Tssr96051 10 122448531 to 122448550 19 + TSS region transcription start site region 96051
Tssr96052 10 122448551 to 122448575 24 + TSS region transcription start site region 96052
Tssr96053 10 122449386 to 122449395 9 + TSS region transcription start site region 96053
Gm48878 10 122454132 to 122456809 2677 + unclassified gene predicted gene, 48878
D10Mit238 10 122479287 to 122479400 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 238
Gm40791 10 122541185 to 122543405 2220 + lncRNA gene predicted gene, 40791
A130077B15Rik 10 122565023 to 122569891 4868 - lincRNA gene RIKEN cDNA A130077B15 gene
Tssr99652 10 122569874 to 122569908 34 - TSS region transcription start site region 99652
Gm36284 10 122583975 to 122678741 94766 - lncRNA gene predicted gene, 36284
Tssr96054 10 122615883 to 122615909 26 + TSS region transcription start site region 96054
Gm40793 10 122624520 to 122630095 5575 + lncRNA gene predicted gene, 40793
Tssr96055 10 122626850 to 122626855 5 + TSS region transcription start site region 96055