Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:121635991-122192315

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hwtf2 10 120000000 to 122000000 2000000 QTL heart weight by femur 2
Cpgi2291 10 121641317 to 121642575 1258 CpG island CpG island 2291
D930020B18Rik 10 121641588 to 121693915 52327 + protein coding gene RIKEN cDNA D930020B18 gene
Cpgi2292 10 121693042 to 121693248 206 CpG island CpG island 2292
Gm35865 10 121703663 to 121705035 1372 - lincRNA gene predicted gene, 35865
Cpgi2293 10 121719318 to 121719514 196 CpG island CpG island 2293
Cpgi2294 10 121721554 to 121721712 158 CpG island CpG island 2294
Cpgi2295 10 121739403 to 121740532 1129 CpG island CpG island 2295
Tssr96047 10 121739915 to 121739965 50 + TSS region transcription start site region 96047
BC048403 10 121739937 to 121752878 12941 + protein coding gene cDNA sequence BC048403
Tssr99640 10 121740311 to 121740324 13 - TSS region transcription start site region 99640
Cpgi2296 10 121750360 to 121750680 320 CpG island CpG island 2296
Tssr3384 10 121750446 to 121750457 11 + TSS region transcription start site region 3384
Srgap1 10 121780991 to 122047315 266324 - protein coding gene SLIT-ROBO Rho GTPase activating protein 1
Cpgi2297 10 121781196 to 121781766 570 CpG island CpG island 2297
Gm46183 10 121796214 to 121811475 15261 + lncRNA gene predicted gene, 46183
Tssr99641 10 121800574 to 121800578 4 - TSS region transcription start site region 99641
Tssr99642 10 121807098 to 121807109 11 - TSS region transcription start site region 99642
Tssr99643 10 121826329 to 121826332 3 - TSS region transcription start site region 99643
Gm48804 10 121829018 to 121832058 3040 - unclassified gene predicted gene, 48804
Cpgi2298 10 121899324 to 121899844 520 CpG island CpG island 2298
4930402N20Rik 10 121952715 to 121953533 818 unclassified gene RIKEN cDNA 4930402N20 gene
Tssr99644 10 121988060 to 121988061 1 - TSS region transcription start site region 99644
D10Mit268 10 122021768 to 122021889 121 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 268
2610011I18Rik 10 122031360 to 122032847 1487 unclassified gene RIKEN cDNA 2610011I18 gene
Cpgi2299 10 122046743 to 122048259 1516 CpG island CpG island 2299
Tssr99645 10 122047265 to 122047289 24 - TSS region transcription start site region 99645
Tssr99646 10 122047293 to 122047322 29 - TSS region transcription start site region 99646
Tssr99647 10 122047467 to 122047503 36 - TSS region transcription start site region 99647
Tssr99648 10 122047765 to 122047852 87 - TSS region transcription start site region 99648
Gm48826 10 122066343 to 122067021 678 + pseudogene predicted gene, 48826
Gm48827 10 122069136 to 122069451 315 - pseudogene predicted gene, 48827
Gm48828 10 122074788 to 122074998 210 + pseudogene predicted gene, 48828
Gm9079 10 122078112 to 122079879 1767 - pseudogene predicted gene 9079
Rxylt1 10 122081120 to 122097366 16246 - protein coding gene ribitol xylosyltransferase 1
Tssr99649 10 122096465 to 122096468 3 - TSS region transcription start site region 99649
Cpgi2300 10 122096519 to 122097866 1347 CpG island CpG island 2300
Tssr99650 10 122097042 to 122097073 31 - TSS region transcription start site region 99650
Tssr99651 10 122097078 to 122097196 118 - TSS region transcription start site region 99651
Gm4489 10 122119700 to 122130558 10858 + lincRNA gene predicted gene 4489
Gm9081 10 122169373 to 122170363 990 + pseudogene predicted gene 9081