Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:121586588-121748915

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbk1 10 121546455 to 121586787 40332 - protein coding gene TANK-binding kinase 1
Cpgi2289 10 121586247 to 121587320 1073 CpG island CpG island 2289
Tssr99626 10 121586710 to 121586721 11 - TSS region transcription start site region 99626
Tssr99627 10 121586730 to 121586803 73 - TSS region transcription start site region 99627
Tssr99628 10 121586813 to 121586824 11 - TSS region transcription start site region 99628
Tssr99629 10 121586841 to 121586852 11 - TSS region transcription start site region 99629
Tssr99630 10 121586869 to 121586880 11 - TSS region transcription start site region 99630
Xpot 10 121587380 to 121626332 38952 - protein coding gene exportin, tRNA (nuclear export receptor for tRNAs)
Gm35816 10 121598585 to 121599580 995 - lncRNA gene predicted gene, 35816
Tssr99631 10 121603353 to 121603358 5 - TSS region transcription start site region 99631
Tssr99632 10 121603562 to 121603586 24 - TSS region transcription start site region 99632
Gm24330 10 121618468 to 121618543 75 - miRNA gene predicted gene, 24330
Cpgi2290 10 121625744 to 121626864 1120 CpG island CpG island 2290
Tssr99633 10 121626167 to 121626178 11 - TSS region transcription start site region 99633
Tssr99634 10 121626290 to 121626310 20 - TSS region transcription start site region 99634
Tssr99635 10 121626318 to 121626334 16 - TSS region transcription start site region 99635
Tssr99636 10 121626347 to 121626380 33 - TSS region transcription start site region 99636
Tssr99637 10 121626391 to 121626418 27 - TSS region transcription start site region 99637
Tssr99638 10 121626452 to 121626513 61 - TSS region transcription start site region 99638
Tssr96045 10 121626596 to 121626652 56 + TSS region transcription start site region 96045
Tssr96046 10 121626654 to 121626661 7 + TSS region transcription start site region 96046
Tssr99639 10 121628763 to 121628776 13 - TSS region transcription start site region 99639
Cpgi2291 10 121641317 to 121642575 1258 CpG island CpG island 2291
D930020B18Rik 10 121641588 to 121693915 52327 + protein coding gene RIKEN cDNA D930020B18 gene
Cpgi2292 10 121693042 to 121693248 206 CpG island CpG island 2292
Gm35865 10 121703663 to 121705035 1372 - lincRNA gene predicted gene, 35865
Cpgi2293 10 121719318 to 121719514 196 CpG island CpG island 2293
Cpgi2294 10 121721554 to 121721712 158 CpG island CpG island 2294
Cpgi2295 10 121739403 to 121740532 1129 CpG island CpG island 2295
Tssr96047 10 121739915 to 121739965 50 + TSS region transcription start site region 96047
BC048403 10 121739937 to 121752878 12941 + protein coding gene cDNA sequence BC048403
Tssr99640 10 121740311 to 121740324 13 - TSS region transcription start site region 99640