Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:121531347-121721380

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2288 10 121533296 to 121533696 400 CpG island CpG island 2288
Tbk1 10 121546455 to 121586787 40332 - protein coding gene TANK-binding kinase 1
Tssr99621 10 121553941 to 121553963 22 - TSS region transcription start site region 99621
Tssr99622 10 121555655 to 121555659 4 - TSS region transcription start site region 99622
Tssr99623 10 121585873 to 121585883 10 - TSS region transcription start site region 99623
Tssr99624 10 121585901 to 121585910 9 - TSS region transcription start site region 99624
Tssr99625 10 121585922 to 121585970 48 - TSS region transcription start site region 99625
Tssr96043 10 121586217 to 121586242 25 + TSS region transcription start site region 96043
Cpgi2289 10 121586247 to 121587320 1073 CpG island CpG island 2289
Tssr96044 10 121586253 to 121586263 10 + TSS region transcription start site region 96044
Tssr99626 10 121586710 to 121586721 11 - TSS region transcription start site region 99626
Tssr99627 10 121586730 to 121586803 73 - TSS region transcription start site region 99627
Tssr99628 10 121586813 to 121586824 11 - TSS region transcription start site region 99628
Tssr99629 10 121586841 to 121586852 11 - TSS region transcription start site region 99629
Tssr99630 10 121586869 to 121586880 11 - TSS region transcription start site region 99630
Xpot 10 121587380 to 121626332 38952 - protein coding gene exportin, tRNA (nuclear export receptor for tRNAs)
Gm35816 10 121598585 to 121599580 995 - lncRNA gene predicted gene, 35816
Tssr99631 10 121603353 to 121603358 5 - TSS region transcription start site region 99631
Tssr99632 10 121603562 to 121603586 24 - TSS region transcription start site region 99632
Gm24330 10 121618468 to 121618543 75 - miRNA gene predicted gene, 24330
Cpgi2290 10 121625744 to 121626864 1120 CpG island CpG island 2290
Tssr99633 10 121626167 to 121626178 11 - TSS region transcription start site region 99633
Tssr99634 10 121626290 to 121626310 20 - TSS region transcription start site region 99634
Tssr99635 10 121626318 to 121626334 16 - TSS region transcription start site region 99635
Tssr99636 10 121626347 to 121626380 33 - TSS region transcription start site region 99636
Tssr99637 10 121626391 to 121626418 27 - TSS region transcription start site region 99637
Tssr99638 10 121626452 to 121626513 61 - TSS region transcription start site region 99638
Tssr96045 10 121626596 to 121626652 56 + TSS region transcription start site region 96045
Tssr96046 10 121626654 to 121626661 7 + TSS region transcription start site region 96046
Tssr99639 10 121628763 to 121628776 13 - TSS region transcription start site region 99639
Cpgi2291 10 121641317 to 121642575 1258 CpG island CpG island 2291
D930020B18Rik 10 121641588 to 121693915 52327 + protein coding gene RIKEN cDNA D930020B18 gene
Cpgi2292 10 121693042 to 121693248 206 CpG island CpG island 2292
Gm35865 10 121703663 to 121705035 1372 - lincRNA gene predicted gene, 35865
Cpgi2293 10 121719318 to 121719514 196 CpG island CpG island 2293