Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:121486217-121686242

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96037 10 121488850 to 121488861 11 + TSS region transcription start site region 96037
Tssr96038 10 121488869 to 121488879 10 + TSS region transcription start site region 96038
Tssr96039 10 121488978 to 121488997 19 + TSS region transcription start site region 96039
Gm40787 10 121488986 to 121490147 1161 + lincRNA gene predicted gene, 40787
Tssr99619 10 121494029 to 121494055 26 - TSS region transcription start site region 99619
Tssr96040 10 121494433 to 121494434 1 + TSS region transcription start site region 96040
Tssr96041 10 121496976 to 121496995 19 + TSS region transcription start site region 96041
Tssr99620 10 121498141 to 121498150 9 - TSS region transcription start site region 99620
Gm46204 10 121505351 to 121505976 625 + lincRNA gene predicted gene, 46204
Gm35696 10 121509947 to 121526473 16526 + lincRNA gene predicted gene, 35696
Tssr96042 10 121510330 to 121510345 15 + TSS region transcription start site region 96042
Cpgi2287 10 121516169 to 121516439 270 CpG island CpG island 2287
Cpgi2288 10 121533296 to 121533696 400 CpG island CpG island 2288
Tbk1 10 121546455 to 121586787 40332 - protein coding gene TANK-binding kinase 1
Tssr99621 10 121553941 to 121553963 22 - TSS region transcription start site region 99621
Tssr99622 10 121555655 to 121555659 4 - TSS region transcription start site region 99622
Tssr99623 10 121585873 to 121585883 10 - TSS region transcription start site region 99623
Tssr99624 10 121585901 to 121585910 9 - TSS region transcription start site region 99624
Tssr99625 10 121585922 to 121585970 48 - TSS region transcription start site region 99625
Tssr96043 10 121586217 to 121586242 25 + TSS region transcription start site region 96043
Cpgi2289 10 121586247 to 121587320 1073 CpG island CpG island 2289
Tssr96044 10 121586253 to 121586263 10 + TSS region transcription start site region 96044
Tssr99626 10 121586710 to 121586721 11 - TSS region transcription start site region 99626
Tssr99627 10 121586730 to 121586803 73 - TSS region transcription start site region 99627
Tssr99628 10 121586813 to 121586824 11 - TSS region transcription start site region 99628
Tssr99629 10 121586841 to 121586852 11 - TSS region transcription start site region 99629
Tssr99630 10 121586869 to 121586880 11 - TSS region transcription start site region 99630
Xpot 10 121587380 to 121626332 38952 - protein coding gene exportin, tRNA (nuclear export receptor for tRNAs)
Gm35816 10 121598585 to 121599580 995 - lncRNA gene predicted gene, 35816
Tssr99631 10 121603353 to 121603358 5 - TSS region transcription start site region 99631
Tssr99632 10 121603562 to 121603586 24 - TSS region transcription start site region 99632
Gm24330 10 121618468 to 121618543 75 - miRNA gene predicted gene, 24330
Cpgi2290 10 121625744 to 121626864 1120 CpG island CpG island 2290
Tssr99633 10 121626167 to 121626178 11 - TSS region transcription start site region 99633
Tssr99634 10 121626290 to 121626310 20 - TSS region transcription start site region 99634
Tssr99635 10 121626318 to 121626334 16 - TSS region transcription start site region 99635
Tssr99636 10 121626347 to 121626380 33 - TSS region transcription start site region 99636
Tssr99637 10 121626391 to 121626418 27 - TSS region transcription start site region 99637
Tssr99638 10 121626452 to 121626513 61 - TSS region transcription start site region 99638
Tssr96045 10 121626596 to 121626652 56 + TSS region transcription start site region 96045
Tssr96046 10 121626654 to 121626661 7 + TSS region transcription start site region 96046
Tssr99639 10 121628763 to 121628776 13 - TSS region transcription start site region 99639
Cpgi2291 10 121641317 to 121642575 1258 CpG island CpG island 2291
D930020B18Rik 10 121641588 to 121693915 52327 + protein coding gene RIKEN cDNA D930020B18 gene