Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:120918524-121310245

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lemd3 10 120923413 to 120979332 55919 - protein coding gene LEM domain containing 3
Gm16166 10 120928186 to 120928972 786 + pseudogene predicted gene 16166
Gm23632 10 120974301 to 120974425 124 - miRNA gene predicted gene, 23632
Cpgi2275 10 120977723 to 120979885 2162 CpG island CpG island 2275
Tssr99601 10 120979313 to 120979322 9 - TSS region transcription start site region 99601
Tssr99602 10 120979327 to 120979373 46 - TSS region transcription start site region 99602
Gm35235 10 120979366 to 120980149 783 + lncRNA gene predicted gene, 35235
Tssr96009 10 120979406 to 120979425 19 + TSS region transcription start site region 96009
Gm48341 10 120984756 to 121001061 16305 - lincRNA gene predicted gene, 48341
Wght9 10 121000000 to 60000000 -61000000 QTL weight 9
Lgth11 10 121000000 to 91000000 -30000000 QTL body length 11
Gm40784 10 121022648 to 121029885 7237 + lncRNA gene predicted gene, 40784
Cpgi2276 10 121033588 to 121034466 878 CpG island CpG island 2276
Tssr96010 10 121033960 to 121033983 23 + TSS region transcription start site region 96010
Tssr96011 10 121033985 to 121034012 27 + TSS region transcription start site region 96011
Wif1 10 121034004 to 121100642 66638 + protein coding gene Wnt inhibitory factor 1
Tssr96012 10 121034014 to 121034038 24 + TSS region transcription start site region 96012
Tssr96013 10 121034040 to 121034049 9 + TSS region transcription start site region 96013
Tssr96014 10 121034059 to 121034074 15 + TSS region transcription start site region 96014
Tssr96015 10 121034144 to 121034153 9 + TSS region transcription start site region 96015
Tssr3380 10 121034154 to 121034159 5 + TSS region transcription start site region 3380
Tssr96016 10 121034168 to 121034197 29 + TSS region transcription start site region 96016
Tssr96017 10 121034199 to 121034218 19 + TSS region transcription start site region 96017
Tssr3381 10 121034228 to 121034231 3 + TSS region transcription start site region 3381
Tssr96018 10 121034248 to 121034265 17 + TSS region transcription start site region 96018
Tssr96019 10 121034273 to 121034292 19 + TSS region transcription start site region 96019
Tssr96020 10 121096588 to 121096618 30 + TSS region transcription start site region 96020
Gm48410 10 121113524 to 121115245 1721 - lincRNA gene predicted gene, 48410
Cpgi2277 10 121124517 to 121124712 195 CpG island CpG island 2277
Gm10741 10 121160845 to 121162530 1685 - lncRNA gene predicted gene 10741
Gm48426 10 121185030 to 121185511 481 - unclassified gene predicted gene, 48426
4930432O09Rik 10 121199141 to 121202649 3508 - lincRNA gene RIKEN cDNA 4930432O09 gene
Tssr3382 10 121202749 to 121202752 3 + TSS region transcription start site region 3382
Gm35404 10 121243002 to 121243843 841 + lincRNA gene predicted gene, 35404
Cpgi2278 10 121247049 to 121247273 224 CpG island CpG island 2278
Tbc1d30 10 121263819 to 121311189 47370 - protein coding gene TBC1 domain family, member 30
Cpgi2279 10 121267052 to 121267390 338 CpG island CpG island 2279
Tgq21 10 121274116 to 121274116 0 QTL triglyceride QTL 21
Cpgi2280 10 121294589 to 121294819 230 CpG island CpG island 2280
Cpgi2281 10 121297274 to 121297480 206 CpG island CpG island 2281
Tssr99603 10 121297369 to 121297385 16 - TSS region transcription start site region 99603
Cpgi2282 10 121310026 to 121311367 1341 CpG island CpG island 2282