Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:119489493-120149541

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grip1 10 119453830 to 120087261 633431 + protein coding gene glutamate receptor interacting protein 1
Cpgi2257 10 119490917 to 119491138 221 CpG island CpG island 2257
Tssr95964 10 119502131 to 119502169 38 + TSS region transcription start site region 95964
Tssr95965 10 119502724 to 119502736 12 + TSS region transcription start site region 95965
Gm47342 10 119523838 to 119524458 620 + unclassified gene predicted gene, 47342
Tssr95966 10 119548748 to 119548752 4 + TSS region transcription start site region 95966
Tssr95967 10 119549473 to 119549477 4 + TSS region transcription start site region 95967
Gm47027 10 119600363 to 119617720 17357 - antisense lncRNA gene predicted gene, 47027
Gm40780 10 119629735 to 119646813 17078 + lncRNA gene predicted gene, 40780
Gm47026 10 119654064 to 119656395 2331 + unclassified gene predicted gene, 47026
Tssr3370 10 119665144 to 119665145 1 + TSS region transcription start site region 3370
D10Mit267 10 119671003 to 119671105 102 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 267
Aggr1 10 119671003 to 125739363 6068360 QTL aggression 1
Leg2 10 119671003 to 119671105 102 QTL longevity extending gene 2
Tssr95968 10 119672681 to 119672706 25 + TSS region transcription start site region 95968
Tssr95969 10 119692009 to 119692026 17 + TSS region transcription start site region 95969
Tssr95970 10 119692033 to 119692048 15 + TSS region transcription start site region 95970
Tssr95971 10 119692050 to 119692069 19 + TSS region transcription start site region 95971
Tssr95972 10 119692395 to 119692407 12 + TSS region transcription start site region 95972
Tssr3371 10 119692424 to 119692433 9 + TSS region transcription start site region 3371
Grip1os2 10 119746063 to 119761699 15636 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 2
Gm46207 10 119759618 to 119762392 2774 + lncRNA gene predicted gene, 46207
Tssr95973 10 119819493 to 119819541 48 + TSS region transcription start site region 95973
Grip1os1 10 119825204 to 119852390 27186 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 1
Tssr3372 10 119827898 to 119827899 1 + TSS region transcription start site region 3372
Tssr99524 10 119850663 to 119850673 10 - TSS region transcription start site region 99524
Tssr99525 10 119850680 to 119850687 7 - TSS region transcription start site region 99525
Tssr95974 10 119850734 to 119850755 21 + TSS region transcription start site region 95974
D10Mit204 10 119915147 to 119915244 97 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 204
D10Mit187 10 119987251 to 119987504 253 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 187
Tssr95975 10 119992897 to 119992904 7 + TSS region transcription start site region 95975
Tssr3373 10 119992911 to 119992912 1 + TSS region transcription start site region 3373
Tssr95976 10 119992916 to 119992958 42 + TSS region transcription start site region 95976
Tssr95977 10 119992962 to 119992972 10 + TSS region transcription start site region 95977
Hwtf2 10 120000000 to 122000000 2000000 QTL heart weight by femur 2
Exq1 10 120011947 to 120012034 87 QTL exploratory and excitability QTL 1
D10Mit237 10 120011947 to 120012034 87 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 237
Helb 10 120083608 to 120112987 29379 - protein coding gene helicase (DNA) B
Tssr99526 10 120092696 to 120092744 48 - TSS region transcription start site region 99526
Cpgi2258 10 120112513 to 120113383 870 CpG island CpG island 2258
Tssr99527 10 120112865 to 120112911 46 - TSS region transcription start site region 99527
Tssr99528 10 120112913 to 120112945 32 - TSS region transcription start site region 99528
Tssr99529 10 120112946 to 120112959 13 - TSS region transcription start site region 99529
Tssr99530 10 120112985 to 120113002 17 - TSS region transcription start site region 99530
Tssr95978 10 120113083 to 120113100 17 + TSS region transcription start site region 95978
Cpgi2259 10 120120076 to 120120378 302 CpG island CpG island 2259
Tssr99531 10 120140612 to 120140617 5 - TSS region transcription start site region 99531
Irak3 10 120141648 to 120201744 60096 - protein coding gene interleukin-1 receptor-associated kinase 3
Tssr99532 10 120142174 to 120142186 12 - TSS region transcription start site region 99532
Tssr99533 10 120142425 to 120142448 23 - TSS region transcription start site region 99533
Tssr99534 10 120142752 to 120142777 25 - TSS region transcription start site region 99534
Tssr99535 10 120142802 to 120142813 11 - TSS region transcription start site region 99535
Tssr99536 10 120142840 to 120142862 22 - TSS region transcription start site region 99536