Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118893538-120013608

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26976 10 118892911 to 118893818 907 + pseudogene predicted gene, 26976
Gm38403 10 118920381 to 118927143 6762 - lincRNA gene predicted gene, 38403
Tssr99511 10 118924810 to 118924811 1 - TSS region transcription start site region 99511
Gm33624 10 118985970 to 119007219 21249 - lncRNA gene predicted gene, 33624
Gm47461 10 119018346 to 119021670 3324 - lincRNA gene predicted gene, 47461
Cpgi2253 10 119021231 to 119021587 356 CpG island CpG island 2253
Gm33677 10 119028290 to 119050499 22209 - lincRNA gene predicted gene, 33677
Gm33861 10 119067405 to 119076223 8818 - lncRNA gene predicted gene, 33861
Tssr99512 10 119076159 to 119076173 14 - TSS region transcription start site region 99512
Tssr99513 10 119076180 to 119076192 12 - TSS region transcription start site region 99513
Gm18904 10 119090342 to 119090848 506 + pseudogene predicted gene, 18904
1700064J06Rik 10 119092905 to 119103107 10202 + lincRNA gene RIKEN cDNA 1700064J06 gene
Cpgi2254 10 119094606 to 119094923 317 CpG island CpG island 2254
Tssr95955 10 119107828 to 119107832 4 + TSS region transcription start site region 95955
Gm47480 10 119111624 to 119122966 11342 + lincRNA gene predicted gene, 47480
Gm33982 10 119130629 to 119132939 2310 + lncRNA gene predicted gene, 33982
Tssr95956 10 119131105 to 119131114 9 + TSS region transcription start site region 95956
Gm34045 10 119135154 to 119140827 5673 - lincRNA gene predicted gene, 34045
Cand1 10 119199255 to 119240055 40800 - protein coding gene cullin associated and neddylation disassociated 1
Cpgi2255 10 119239065 to 119240654 1589 CpG island CpG island 2255
Tssr99514 10 119239500 to 119239516 16 - TSS region transcription start site region 99514
Tssr99515 10 119239517 to 119239532 15 - TSS region transcription start site region 99515
Tssr99516 10 119239735 to 119239750 15 - TSS region transcription start site region 99516
Tssr99517 10 119239815 to 119239826 11 - TSS region transcription start site region 99517
Tssr99518 10 119239979 to 119239994 15 - TSS region transcription start site region 99518
Tssr99519 10 119240006 to 119240092 86 - TSS region transcription start site region 99519
Tssr99520 10 119240103 to 119240130 27 - TSS region transcription start site region 99520
Tssr99521 10 119240132 to 119240153 21 - TSS region transcription start site region 99521
Tssr95957 10 119240318 to 119240330 12 + TSS region transcription start site region 95957
Tssr99522 10 119240490 to 119240536 46 - TSS region transcription start site region 99522
Tssr95958 10 119255372 to 119255374 2 + TSS region transcription start site region 95958
Tssr99523 10 119298690 to 119298691 1 - TSS region transcription start site region 99523
4930477N07Rik 10 119320234 to 119331862 11628 + lincRNA gene RIKEN cDNA 4930477N07 gene
Gm19090 10 119342492 to 119343265 773 + pseudogene predicted gene, 19090
Gm40778 10 119409879 to 119411222 1343 - lncRNA gene predicted gene, 40778
Tssr95959 10 119413432 to 119413439 7 + TSS region transcription start site region 95959
1700025F24Rik 10 119413444 to 119426864 13420 + lincRNA gene RIKEN cDNA 1700025F24 gene
Tssr95960 10 119413455 to 119413475 20 + TSS region transcription start site region 95960
D10Mit235.1 10 119415347 to 119415485 138 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 235.1
D10Mit235 10 119415463 to 119415580 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 235
Grip1os3 10 119429367 to 119455379 26012 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 3
D10Mit164 10 119435755 to 119435877 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 164
Gm16321 10 119442679 to 119443624 945 - antisense lncRNA gene predicted gene 16321
Cpgi2256 10 119453154 to 119455129 1975 CpG island CpG island 2256
Tssr95961 10 119453538 to 119453608 70 + TSS region transcription start site region 95961
Grip1 10 119453830 to 120087261 633431 + protein coding gene glutamate receptor interacting protein 1
Gm47341 10 119462350 to 119464521 2171 + unclassified gene predicted gene, 47341
Tssr95962 10 119468723 to 119468725 2 + TSS region transcription start site region 95962
Gm47024 10 119471318 to 119473888 2570 + unclassified gene predicted gene, 47024
Tssr95963 10 119481515 to 119481518 3 + TSS region transcription start site region 95963
Cpgi2257 10 119490917 to 119491138 221 CpG island CpG island 2257
Tssr95964 10 119502131 to 119502169 38 + TSS region transcription start site region 95964
Tssr95965 10 119502724 to 119502736 12 + TSS region transcription start site region 95965
Gm47342 10 119523838 to 119524458 620 + unclassified gene predicted gene, 47342
Tssr95966 10 119548748 to 119548752 4 + TSS region transcription start site region 95966
Tssr95967 10 119549473 to 119549477 4 + TSS region transcription start site region 95967
Gm47027 10 119600363 to 119617720 17357 - antisense lncRNA gene predicted gene, 47027
Gm40780 10 119629735 to 119646813 17078 + lncRNA gene predicted gene, 40780
Gm47026 10 119654064 to 119656395 2331 + unclassified gene predicted gene, 47026
Tssr3370 10 119665144 to 119665145 1 + TSS region transcription start site region 3370
D10Mit267 10 119671003 to 119671105 102 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 267
Aggr1 10 119671003 to 125739363 6068360 QTL aggression 1
Leg2 10 119671003 to 119671105 102 QTL longevity extending gene 2
Tssr95968 10 119672681 to 119672706 25 + TSS region transcription start site region 95968
Tssr95969 10 119692009 to 119692026 17 + TSS region transcription start site region 95969
Tssr95970 10 119692033 to 119692048 15 + TSS region transcription start site region 95970
Tssr95971 10 119692050 to 119692069 19 + TSS region transcription start site region 95971
Tssr95972 10 119692395 to 119692407 12 + TSS region transcription start site region 95972
Tssr3371 10 119692424 to 119692433 9 + TSS region transcription start site region 3371
Grip1os2 10 119746063 to 119761699 15636 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 2
Gm46207 10 119759618 to 119762392 2774 + lncRNA gene predicted gene, 46207
Tssr95973 10 119819493 to 119819541 48 + TSS region transcription start site region 95973
Grip1os1 10 119825204 to 119852390 27186 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 1
Tssr3372 10 119827898 to 119827899 1 + TSS region transcription start site region 3372
Tssr99524 10 119850663 to 119850673 10 - TSS region transcription start site region 99524
Tssr99525 10 119850680 to 119850687 7 - TSS region transcription start site region 99525
Tssr95974 10 119850734 to 119850755 21 + TSS region transcription start site region 95974
D10Mit204 10 119915147 to 119915244 97 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 204
D10Mit187 10 119987251 to 119987504 253 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 187
Tssr95975 10 119992897 to 119992904 7 + TSS region transcription start site region 95975
Tssr3373 10 119992911 to 119992912 1 + TSS region transcription start site region 3373
Tssr95976 10 119992916 to 119992958 42 + TSS region transcription start site region 95976
Tssr95977 10 119992962 to 119992972 10 + TSS region transcription start site region 95977
Hwtf2 10 120000000 to 122000000 2000000 QTL heart weight by femur 2
D10Mit237 10 120011947 to 120012034 87 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 237
Exq1 10 120011947 to 120012034 87 QTL exploratory and excitability QTL 1