Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118515359-121945363

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443 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Ifngas1 10 118502035 to 118556525 54490 - antisense lncRNA gene Ifng antisense RNA 1
Tmevp3 10 118553765 to 118655063 101298 QTL Theiler's murine encephalomyelitis virus persistence 3
D10Mit74 10 118553765 to 118553963 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 74
Tssr99499 10 118556526 to 118556542 16 - TSS region transcription start site region 99499
Tssr99500 10 118633443 to 118633447 4 - TSS region transcription start site region 99500
Tssr99501 10 118633485 to 118633508 23 - TSS region transcription start site region 99501
Tssr95950 10 118633748 to 118633775 27 + TSS region transcription start site region 95950
D10Mit234 10 118654934 to 118655063 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 234
D10Mit14 10 118661259 to 118661448 189 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 14
Cfmq3 10 118661259 to 118661448 189 QTL cystic fibrosis modifier QTL 3
Im5 10 118661259 to 118661448 189 QTL immunoregulatory 5
Jckm1 10 118661259 to 120899582 2238323 QTL juvenile cystic kidney modifier 1
Cia29 10 118661448 to 85619118 -33042330 QTL collagen induced arthritis QTL 29
Cpgi2249 10 118676058 to 118676264 206 CpG island CpG island 2249
Tssr95951 10 118714436 to 118714453 17 + TSS region transcription start site region 95951
Gm33337 10 118714481 to 118715726 1245 - lincRNA gene predicted gene, 33337
Tssr99502 10 118715760 to 118715779 19 - TSS region transcription start site region 99502
Tssr95952 10 118715887 to 118715927 40 + TSS region transcription start site region 95952
Gm47425 10 118718146 to 118719428 1282 - lincRNA gene predicted gene, 47425
Gm33439 10 118746703 to 118785158 38455 + lncRNA gene predicted gene, 33439
Gm33481 10 118792223 to 118793228 1005 + lncRNA gene predicted gene, 33481
Tssr99503 10 118796634 to 118796695 61 - TSS region transcription start site region 99503
Cpgi2250 10 118803241 to 118803468 227 CpG island CpG island 2250
Gm4065 10 118803719 to 118805290 1571 - lincRNA gene predicted gene 4065
Gm47434 10 118832588 to 118835106 2518 - unclassified gene predicted gene, 47434
Gm40776 10 118846082 to 118849132 3050 + lncRNA gene predicted gene, 40776
Dyrk2 10 118855603 to 118870209 14606 - protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
Tssr99504 10 118855864 to 118855913 49 - TSS region transcription start site region 99504
Cpgi2251 10 118859683 to 118860805 1122 CpG island CpG island 2251
4932442E05Rik 10 118860826 to 118863542 2716 + protein coding gene RIKEN cDNA 4932442E05 gene
Tssr95953 10 118866125 to 118866130 5 + TSS region transcription start site region 95953
Cpgi2252 10 118867745 to 118870178 2433 CpG island CpG island 2252
Tssr99505 10 118868777 to 118868792 15 - TSS region transcription start site region 99505
Tssr99506 10 118869126 to 118869154 28 - TSS region transcription start site region 99506
Tssr99507 10 118869159 to 118869185 26 - TSS region transcription start site region 99507
Tssr99508 10 118869793 to 118869805 12 - TSS region transcription start site region 99508
Tssr95954 10 118869961 to 118869976 15 + TSS region transcription start site region 95954
Gm40777 10 118871777 to 118882341 10564 + lncRNA gene predicted gene, 40777
Gm10744 10 118880949 to 118883654 2705 - unclassified gene predicted gene 10744
Tssr99509 10 118889241 to 118889255 14 - TSS region transcription start site region 99509
Tssr99510 10 118889256 to 118889266 10 - TSS region transcription start site region 99510
Gm26976 10 118892911 to 118893818 907 + pseudogene predicted gene, 26976
Gm38403 10 118920381 to 118927143 6762 - lincRNA gene predicted gene, 38403
Tssr99511 10 118924810 to 118924811 1 - TSS region transcription start site region 99511
Gm33624 10 118985970 to 119007219 21249 - lncRNA gene predicted gene, 33624
Gm47461 10 119018346 to 119021670 3324 - lincRNA gene predicted gene, 47461
Cpgi2253 10 119021231 to 119021587 356 CpG island CpG island 2253
Gm33677 10 119028290 to 119050499 22209 - lincRNA gene predicted gene, 33677
Gm33861 10 119067405 to 119076223 8818 - lncRNA gene predicted gene, 33861
Tssr99512 10 119076159 to 119076173 14 - TSS region transcription start site region 99512
Tssr99513 10 119076180 to 119076192 12 - TSS region transcription start site region 99513
Gm18904 10 119090342 to 119090848 506 + pseudogene predicted gene, 18904
1700064J06Rik 10 119092905 to 119103107 10202 + lincRNA gene RIKEN cDNA 1700064J06 gene
Cpgi2254 10 119094606 to 119094923 317 CpG island CpG island 2254
Tssr95955 10 119107828 to 119107832 4 + TSS region transcription start site region 95955
Gm47480 10 119111624 to 119122966 11342 + lincRNA gene predicted gene, 47480
Gm33982 10 119130629 to 119132939 2310 + lncRNA gene predicted gene, 33982
Tssr95956 10 119131105 to 119131114 9 + TSS region transcription start site region 95956
Gm34045 10 119135154 to 119140827 5673 - lincRNA gene predicted gene, 34045
Cand1 10 119199255 to 119240055 40800 - protein coding gene cullin associated and neddylation disassociated 1
Cpgi2255 10 119239065 to 119240654 1589 CpG island CpG island 2255
Tssr99514 10 119239500 to 119239516 16 - TSS region transcription start site region 99514
Tssr99515 10 119239517 to 119239532 15 - TSS region transcription start site region 99515
Tssr99516 10 119239735 to 119239750 15 - TSS region transcription start site region 99516
Tssr99517 10 119239815 to 119239826 11 - TSS region transcription start site region 99517
Tssr99518 10 119239979 to 119239994 15 - TSS region transcription start site region 99518
Tssr99519 10 119240006 to 119240092 86 - TSS region transcription start site region 99519
Tssr99520 10 119240103 to 119240130 27 - TSS region transcription start site region 99520
Tssr99521 10 119240132 to 119240153 21 - TSS region transcription start site region 99521
Tssr95957 10 119240318 to 119240330 12 + TSS region transcription start site region 95957
Tssr99522 10 119240490 to 119240536 46 - TSS region transcription start site region 99522
Tssr95958 10 119255372 to 119255374 2 + TSS region transcription start site region 95958
Tssr99523 10 119298690 to 119298691 1 - TSS region transcription start site region 99523
4930477N07Rik 10 119320234 to 119331862 11628 + lincRNA gene RIKEN cDNA 4930477N07 gene
Gm19090 10 119342492 to 119343265 773 + pseudogene predicted gene, 19090
Gm40778 10 119409879 to 119411222 1343 - lncRNA gene predicted gene, 40778
Tssr95959 10 119413432 to 119413439 7 + TSS region transcription start site region 95959
1700025F24Rik 10 119413444 to 119426864 13420 + lincRNA gene RIKEN cDNA 1700025F24 gene
Tssr95960 10 119413455 to 119413475 20 + TSS region transcription start site region 95960
D10Mit235.1 10 119415347 to 119415485 138 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 235.1
D10Mit235 10 119415463 to 119415580 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 235
Grip1os3 10 119429367 to 119455379 26012 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 3
D10Mit164 10 119435755 to 119435877 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 164
Gm16321 10 119442679 to 119443624 945 - antisense lncRNA gene predicted gene 16321
Cpgi2256 10 119453154 to 119455129 1975 CpG island CpG island 2256
Tssr95961 10 119453538 to 119453608 70 + TSS region transcription start site region 95961
Grip1 10 119453830 to 120087261 633431 + protein coding gene glutamate receptor interacting protein 1
Gm47341 10 119462350 to 119464521 2171 + unclassified gene predicted gene, 47341
Tssr95962 10 119468723 to 119468725 2 + TSS region transcription start site region 95962
Gm47024 10 119471318 to 119473888 2570 + unclassified gene predicted gene, 47024
Tssr95963 10 119481515 to 119481518 3 + TSS region transcription start site region 95963
Cpgi2257 10 119490917 to 119491138 221 CpG island CpG island 2257
Tssr95964 10 119502131 to 119502169 38 + TSS region transcription start site region 95964
Tssr95965 10 119502724 to 119502736 12 + TSS region transcription start site region 95965
Gm47342 10 119523838 to 119524458 620 + unclassified gene predicted gene, 47342
Tssr95966 10 119548748 to 119548752 4 + TSS region transcription start site region 95966
Tssr95967 10 119549473 to 119549477 4 + TSS region transcription start site region 95967
Gm47027 10 119600363 to 119617720 17357 - antisense lncRNA gene predicted gene, 47027
Gm40780 10 119629735 to 119646813 17078 + lncRNA gene predicted gene, 40780
Gm47026 10 119654064 to 119656395 2331 + unclassified gene predicted gene, 47026
Tssr3370 10 119665144 to 119665145 1 + TSS region transcription start site region 3370
Aggr1 10 119671003 to 125739363 6068360 QTL aggression 1
D10Mit267 10 119671003 to 119671105 102 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 267
Leg2 10 119671003 to 119671105 102 QTL longevity extending gene 2
Tssr95968 10 119672681 to 119672706 25 + TSS region transcription start site region 95968
Tssr95969 10 119692009 to 119692026 17 + TSS region transcription start site region 95969
Tssr95970 10 119692033 to 119692048 15 + TSS region transcription start site region 95970
Tssr95971 10 119692050 to 119692069 19 + TSS region transcription start site region 95971
Tssr95972 10 119692395 to 119692407 12 + TSS region transcription start site region 95972
Tssr3371 10 119692424 to 119692433 9 + TSS region transcription start site region 3371
Grip1os2 10 119746063 to 119761699 15636 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 2
Gm46207 10 119759618 to 119762392 2774 + lncRNA gene predicted gene, 46207
Tssr95973 10 119819493 to 119819541 48 + TSS region transcription start site region 95973
Grip1os1 10 119825204 to 119852390 27186 - antisense lncRNA gene glutamate receptor interacting protein 1, opposite strand 1
Tssr3372 10 119827898 to 119827899 1 + TSS region transcription start site region 3372
Tssr99524 10 119850663 to 119850673 10 - TSS region transcription start site region 99524
Tssr99525 10 119850680 to 119850687 7 - TSS region transcription start site region 99525
Tssr95974 10 119850734 to 119850755 21 + TSS region transcription start site region 95974
D10Mit204 10 119915147 to 119915244 97 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 204
D10Mit187 10 119987251 to 119987504 253 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 187
Tssr95975 10 119992897 to 119992904 7 + TSS region transcription start site region 95975
Tssr3373 10 119992911 to 119992912 1 + TSS region transcription start site region 3373
Tssr95976 10 119992916 to 119992958 42 + TSS region transcription start site region 95976
Tssr95977 10 119992962 to 119992972 10 + TSS region transcription start site region 95977
Hwtf2 10 120000000 to 122000000 2000000 QTL heart weight by femur 2
Exq1 10 120011947 to 120012034 87 QTL exploratory and excitability QTL 1
D10Mit237 10 120011947 to 120012034 87 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 237
Helb 10 120083608 to 120112987 29379 - protein coding gene helicase (DNA) B
Tssr99526 10 120092696 to 120092744 48 - TSS region transcription start site region 99526
Cpgi2258 10 120112513 to 120113383 870 CpG island CpG island 2258
Tssr99527 10 120112865 to 120112911 46 - TSS region transcription start site region 99527
Tssr99528 10 120112913 to 120112945 32 - TSS region transcription start site region 99528
Tssr99529 10 120112946 to 120112959 13 - TSS region transcription start site region 99529
Tssr99530 10 120112985 to 120113002 17 - TSS region transcription start site region 99530
Tssr95978 10 120113083 to 120113100 17 + TSS region transcription start site region 95978
Cpgi2259 10 120120076 to 120120378 302 CpG island CpG island 2259
Tssr99531 10 120140612 to 120140617 5 - TSS region transcription start site region 99531
Irak3 10 120141648 to 120201744 60096 - protein coding gene interleukin-1 receptor-associated kinase 3
Tssr99532 10 120142174 to 120142186 12 - TSS region transcription start site region 99532
Tssr99533 10 120142425 to 120142448 23 - TSS region transcription start site region 99533
Tssr99534 10 120142752 to 120142777 25 - TSS region transcription start site region 99534
Tssr99535 10 120142802 to 120142813 11 - TSS region transcription start site region 99535
Tssr99536 10 120142840 to 120142862 22 - TSS region transcription start site region 99536
D10Mit236 10 120158645 to 120158820 175 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 236
Tssr99537 10 120158805 to 120158836 31 - TSS region transcription start site region 99537
Tssr99538 10 120159479 to 120159546 67 - TSS region transcription start site region 99538
Tssr99539 10 120159566 to 120159584 18 - TSS region transcription start site region 99539
Tssr99540 10 120159604 to 120159619 15 - TSS region transcription start site region 99540
Tssr99541 10 120160100 to 120160106 6 - TSS region transcription start site region 99541
Tssr3374 10 120160375 to 120160379 4 + TSS region transcription start site region 3374
Tssr95979 10 120160709 to 120160731 22 + TSS region transcription start site region 95979
Tssr99542 10 120161441 to 120161452 11 - TSS region transcription start site region 99542
Tssr95980 10 120162210 to 120162220 10 + TSS region transcription start site region 95980
Tssr95981 10 120165390 to 120165395 5 + TSS region transcription start site region 95981
Gm47009 10 120168649 to 120170345 1696 + antisense lncRNA gene predicted gene, 47009
Tssr95982 10 120169407 to 120169418 11 + TSS region transcription start site region 95982
Tssr99543 10 120170332 to 120170343 11 - TSS region transcription start site region 99543
Tssr99544 10 120170413 to 120170422 9 - TSS region transcription start site region 99544
Tssr99545 10 120170433 to 120170454 21 - TSS region transcription start site region 99545
Tssr99546 10 120171313 to 120171326 13 - TSS region transcription start site region 99546
Tssr99547 10 120171350 to 120171357 7 - TSS region transcription start site region 99547
Tssr95983 10 120172015 to 120172020 5 + TSS region transcription start site region 95983
Tssr99548 10 120173672 to 120173700 28 - TSS region transcription start site region 99548
Gm34545 10 120173773 to 120190715 16942 + lncRNA gene predicted gene, 34545
Tssr99549 10 120174315 to 120174318 3 - TSS region transcription start site region 99549
Tssr99550 10 120174334 to 120174365 31 - TSS region transcription start site region 99550
Tssr95984 10 120174553 to 120174562 9 + TSS region transcription start site region 95984
Tssr99551 10 120175766 to 120175775 9 - TSS region transcription start site region 99551
Gm40781 10 120190723 to 120194736 4013 + lncRNA gene predicted gene, 40781
Tssr99552 10 120193340 to 120193353 13 - TSS region transcription start site region 99552
Tssr99553 10 120193368 to 120193379 11 - TSS region transcription start site region 99553
Tssr99554 10 120193380 to 120193396 16 - TSS region transcription start site region 99554
Tssr99555 10 120193420 to 120193436 16 - TSS region transcription start site region 99555
Tssr99556 10 120193780 to 120193803 23 - TSS region transcription start site region 99556
Tssr99557 10 120198644 to 120198665 21 - TSS region transcription start site region 99557
Cpgi2260 10 120201087 to 120202106 1019 CpG island CpG island 2260
Tssr99558 10 120201090 to 120201109 19 - TSS region transcription start site region 99558
Tssr99559 10 120201196 to 120201233 37 - TSS region transcription start site region 99559
Tssr99560 10 120201413 to 120201426 13 - TSS region transcription start site region 99560
Tssr99561 10 120201464 to 120201483 19 - TSS region transcription start site region 99561
Tssr99562 10 120201499 to 120201554 55 - TSS region transcription start site region 99562
Tssr99563 10 120201558 to 120201575 17 - TSS region transcription start site region 99563
Tssr95985 10 120201586 to 120201660 74 + TSS region transcription start site region 95985
Gm38500 10 120201754 to 120203647 1893 + lncRNA gene predicted gene, 38500
Cpgi2261 10 120208615 to 120209314 699 CpG island CpG island 2261
Tssr95986 10 120208739 to 120208781 42 + TSS region transcription start site region 95986
Tssr95987 10 120208784 to 120208801 17 + TSS region transcription start site region 95987
Tssr95988 10 120208803 to 120208808 5 + TSS region transcription start site region 95988
Tssr95989 10 120208814 to 120208842 28 + TSS region transcription start site region 95989
Tmbim4 10 120208826 to 120224897 16071 + protein coding gene transmembrane BAX inhibitor motif containing 4
Tssr95990 10 120213007 to 120213026 19 + TSS region transcription start site region 95990
Gm40782 10 120222130 to 120223529 1399 + lncRNA gene predicted gene, 40782
Cpgi2262 10 120226931 to 120227810 879 CpG island CpG island 2262
Tssr95991 10 120227030 to 120227081 51 + TSS region transcription start site region 95991
Llph 10 120227060 to 120232071 5011 + protein coding gene LLP homolog, long-term synaptic facilitation (Aplysia)
Tssr95992 10 120227109 to 120227148 39 + TSS region transcription start site region 95992
Tssr95993 10 120227298 to 120227330 32 + TSS region transcription start site region 95993
Tssr3375 10 120227879 to 120227886 7 + TSS region transcription start site region 3375
Tssr95994 10 120230359 to 120230363 4 + TSS region transcription start site region 95994