Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118205760-119225779

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Il22 10 118204942 to 118210047 5105 + protein coding gene interleukin 22
Gm9585 10 118232128 to 118233531 1403 - pseudogene predicted gene 9585
Gm32717 10 118238372 to 118240780 2408 - pseudogene predicted gene, 32717
Gm9029 10 118243800 to 118246209 2409 - pseudogene predicted gene 9029
Tssr95948 10 118253140 to 118253151 11 + TSS region transcription start site region 95948
Gm9030 10 118253259 to 118255668 2409 + pseudogene predicted gene 9030
Gm32802 10 118258688 to 118261096 2408 + pseudogene predicted gene, 32802
Gm9035 10 118265972 to 118267637 1665 + pseudogene predicted gene 9035
Iltifb 10 118289629 to 118295038 5409 - protein coding gene interleukin 10-related T cell-derived inducible factor beta
Gm9040 10 118324561 to 118326969 2408 - pseudogene predicted gene 9040
Gm9044 10 118330000 to 118332408 2408 - pseudogene predicted gene 9044
Gm9045 10 118335423 to 118337831 2408 - pseudogene predicted gene 9045
Gm9046 10 118340847 to 118343255 2408 - pseudogene predicted gene 9046
Gm9048 10 118346271 to 118348679 2408 - pseudogene predicted gene 9048
Gm9049 10 118351697 to 118354105 2408 - pseudogene predicted gene 9049
D10Mit24 10 118439249 to 118439390 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 24
Tssr95949 10 118441044 to 118441050 6 + TSS region transcription start site region 95949
Ifng 10 118441046 to 118445892 4846 + protein coding gene interferon gamma
Gm49751 10 118441419 to 118444140 2721 + unclassified gene predicted gene, 49751
Ifngas1 10 118502035 to 118556525 54490 - antisense lncRNA gene Ifng antisense RNA 1
Tmevp3 10 118553765 to 118655063 101298 QTL Theiler's murine encephalomyelitis virus persistence 3
D10Mit74 10 118553765 to 118553963 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 74
Tssr99499 10 118556526 to 118556542 16 - TSS region transcription start site region 99499
Tssr99500 10 118633443 to 118633447 4 - TSS region transcription start site region 99500
Tssr99501 10 118633485 to 118633508 23 - TSS region transcription start site region 99501
Tssr95950 10 118633748 to 118633775 27 + TSS region transcription start site region 95950
D10Mit234 10 118654934 to 118655063 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 234
D10Mit14 10 118661259 to 118661448 189 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 14
Cfmq3 10 118661259 to 118661448 189 QTL cystic fibrosis modifier QTL 3
Im5 10 118661259 to 118661448 189 QTL immunoregulatory 5
Jckm1 10 118661259 to 120899582 2238323 QTL juvenile cystic kidney modifier 1
Cia29 10 118661448 to 85619118 -33042330 QTL collagen induced arthritis QTL 29
Cpgi2249 10 118676058 to 118676264 206 CpG island CpG island 2249
Tssr95951 10 118714436 to 118714453 17 + TSS region transcription start site region 95951
Gm33337 10 118714481 to 118715726 1245 - lincRNA gene predicted gene, 33337
Tssr99502 10 118715760 to 118715779 19 - TSS region transcription start site region 99502
Tssr95952 10 118715887 to 118715927 40 + TSS region transcription start site region 95952
Gm47425 10 118718146 to 118719428 1282 - lincRNA gene predicted gene, 47425
Gm33439 10 118746703 to 118785158 38455 + lncRNA gene predicted gene, 33439
Gm33481 10 118792223 to 118793228 1005 + lncRNA gene predicted gene, 33481
Tssr99503 10 118796634 to 118796695 61 - TSS region transcription start site region 99503
Cpgi2250 10 118803241 to 118803468 227 CpG island CpG island 2250
Gm4065 10 118803719 to 118805290 1571 - lincRNA gene predicted gene 4065
Gm47434 10 118832588 to 118835106 2518 - unclassified gene predicted gene, 47434
Gm40776 10 118846082 to 118849132 3050 + lncRNA gene predicted gene, 40776
Dyrk2 10 118855603 to 118870209 14606 - protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
Tssr99504 10 118855864 to 118855913 49 - TSS region transcription start site region 99504
Cpgi2251 10 118859683 to 118860805 1122 CpG island CpG island 2251
4932442E05Rik 10 118860826 to 118863542 2716 + protein coding gene RIKEN cDNA 4932442E05 gene
Tssr95953 10 118866125 to 118866130 5 + TSS region transcription start site region 95953
Cpgi2252 10 118867745 to 118870178 2433 CpG island CpG island 2252
Tssr99505 10 118868777 to 118868792 15 - TSS region transcription start site region 99505
Tssr99506 10 118869126 to 118869154 28 - TSS region transcription start site region 99506
Tssr99507 10 118869159 to 118869185 26 - TSS region transcription start site region 99507
Tssr99508 10 118869793 to 118869805 12 - TSS region transcription start site region 99508
Tssr95954 10 118869961 to 118869976 15 + TSS region transcription start site region 95954
Gm40777 10 118871777 to 118882341 10564 + lncRNA gene predicted gene, 40777
Gm10744 10 118880949 to 118883654 2705 - unclassified gene predicted gene 10744
Tssr99509 10 118889241 to 118889255 14 - TSS region transcription start site region 99509
Tssr99510 10 118889256 to 118889266 10 - TSS region transcription start site region 99510
Gm26976 10 118892911 to 118893818 907 + pseudogene predicted gene, 26976
Gm38403 10 118920381 to 118927143 6762 - lincRNA gene predicted gene, 38403
Tssr99511 10 118924810 to 118924811 1 - TSS region transcription start site region 99511
Gm33624 10 118985970 to 119007219 21249 - lncRNA gene predicted gene, 33624
Gm47461 10 119018346 to 119021670 3324 - lincRNA gene predicted gene, 47461
Cpgi2253 10 119021231 to 119021587 356 CpG island CpG island 2253
Gm33677 10 119028290 to 119050499 22209 - lincRNA gene predicted gene, 33677
Gm33861 10 119067405 to 119076223 8818 - lncRNA gene predicted gene, 33861
Tssr99512 10 119076159 to 119076173 14 - TSS region transcription start site region 99512
Tssr99513 10 119076180 to 119076192 12 - TSS region transcription start site region 99513
Gm18904 10 119090342 to 119090848 506 + pseudogene predicted gene, 18904
1700064J06Rik 10 119092905 to 119103107 10202 + lincRNA gene RIKEN cDNA 1700064J06 gene
Cpgi2254 10 119094606 to 119094923 317 CpG island CpG island 2254
Tssr95955 10 119107828 to 119107832 4 + TSS region transcription start site region 95955
Gm47480 10 119111624 to 119122966 11342 + lincRNA gene predicted gene, 47480
Gm33982 10 119130629 to 119132939 2310 + lncRNA gene predicted gene, 33982
Tssr95956 10 119131105 to 119131114 9 + TSS region transcription start site region 95956
Gm34045 10 119135154 to 119140827 5673 - lincRNA gene predicted gene, 34045
Cand1 10 119199255 to 119240055 40800 - protein coding gene cullin associated and neddylation disassociated 1