Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118118087-118259210

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hylaq3 10 111732321 to 118150744 6418423 QTL Hyperlocomotor activity related QTL 3
5330439M10Rik 10 118112517 to 118124094 11577 + lincRNA gene RIKEN cDNA 5330439M10 gene
Cpgi2247 10 118126083 to 118126241 158 CpG island CpG island 2247
Cpgi2248 10 118141398 to 118142441 1043 CpG island CpG island 2248
Tssr95938 10 118141523 to 118141528 5 + TSS region transcription start site region 95938
Tssr95939 10 118141531 to 118141533 2 + TSS region transcription start site region 95939
Tssr95940 10 118141548 to 118141559 11 + TSS region transcription start site region 95940
Tssr95941 10 118141560 to 118141565 5 + TSS region transcription start site region 95941
Tssr99498 10 118141565 to 118141610 45 - TSS region transcription start site region 99498
Tssr95942 10 118141802 to 118141870 68 + TSS region transcription start site region 95942
Mdm1 10 118141811 to 118168997 27186 + protein coding gene transformed mouse 3T3 cell double minute 1
Tssr95943 10 118141885 to 118141898 13 + TSS region transcription start site region 95943
Tssr95944 10 118141903 to 118141912 9 + TSS region transcription start site region 95944
Tssr95945 10 118141917 to 118141928 11 + TSS region transcription start site region 95945
D10Mit180 10 118150611 to 118150744 133 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 180
Cfbw4 10 118150611 to 118150744 133 QTL cystic fibrosis body weight 4
Estq4 10 118150611 to 118150744 133 QTL estradiol regulated response QTL 4
Gn 10 118150744 to 18383585 -99767159 heritable phenotypic marker gentoo
Tssr95946 10 118156108 to 118156112 4 + TSS region transcription start site region 95946
Tssr3369 10 118156597 to 118156599 2 + TSS region transcription start site region 3369
Gm47958 10 118163985 to 118165162 1177 - antisense lncRNA gene predicted gene, 47958
Gm40775 10 118188087 to 118189210 1123 - lncRNA gene predicted gene, 40775
Tssr95947 10 118204822 to 118204827 5 + TSS region transcription start site region 95947
Il22 10 118204942 to 118210047 5105 + protein coding gene interleukin 22
Gm9585 10 118232128 to 118233531 1403 - pseudogene predicted gene 9585
Gm32717 10 118238372 to 118240780 2408 - pseudogene predicted gene, 32717
Gm9029 10 118243800 to 118246209 2409 - pseudogene predicted gene 9029
Tssr95948 10 118253140 to 118253151 11 + TSS region transcription start site region 95948
Gm9030 10 118253259 to 118255668 2409 + pseudogene predicted gene 9030
Gm32802 10 118258688 to 118261096 2408 + pseudogene predicted gene, 32802