Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118117035-118941525

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Hylaq3 10 111732321 to 118150744 6418423 QTL Hyperlocomotor activity related QTL 3
5330439M10Rik 10 118112517 to 118124094 11577 + lincRNA gene RIKEN cDNA 5330439M10 gene
Cpgi2247 10 118126083 to 118126241 158 CpG island CpG island 2247
Cpgi2248 10 118141398 to 118142441 1043 CpG island CpG island 2248
Tssr95938 10 118141523 to 118141528 5 + TSS region transcription start site region 95938
Tssr95939 10 118141531 to 118141533 2 + TSS region transcription start site region 95939
Tssr95940 10 118141548 to 118141559 11 + TSS region transcription start site region 95940
Tssr95941 10 118141560 to 118141565 5 + TSS region transcription start site region 95941
Tssr99498 10 118141565 to 118141610 45 - TSS region transcription start site region 99498
Tssr95942 10 118141802 to 118141870 68 + TSS region transcription start site region 95942
Mdm1 10 118141811 to 118168997 27186 + protein coding gene transformed mouse 3T3 cell double minute 1
Tssr95943 10 118141885 to 118141898 13 + TSS region transcription start site region 95943
Tssr95944 10 118141903 to 118141912 9 + TSS region transcription start site region 95944
Tssr95945 10 118141917 to 118141928 11 + TSS region transcription start site region 95945
D10Mit180 10 118150611 to 118150744 133 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 180
Estq4 10 118150611 to 118150744 133 QTL estradiol regulated response QTL 4
Cfbw4 10 118150611 to 118150744 133 QTL cystic fibrosis body weight 4
Gn 10 118150744 to 18383585 -99767159 heritable phenotypic marker gentoo
Tssr95946 10 118156108 to 118156112 4 + TSS region transcription start site region 95946
Tssr3369 10 118156597 to 118156599 2 + TSS region transcription start site region 3369
Gm47958 10 118163985 to 118165162 1177 - antisense lncRNA gene predicted gene, 47958
Gm40775 10 118188087 to 118189210 1123 - lncRNA gene predicted gene, 40775
Tssr95947 10 118204822 to 118204827 5 + TSS region transcription start site region 95947
Il22 10 118204942 to 118210047 5105 + protein coding gene interleukin 22
Gm9585 10 118232128 to 118233531 1403 - pseudogene predicted gene 9585
Gm32717 10 118238372 to 118240780 2408 - pseudogene predicted gene, 32717
Gm9029 10 118243800 to 118246209 2409 - pseudogene predicted gene 9029
Tssr95948 10 118253140 to 118253151 11 + TSS region transcription start site region 95948
Gm9030 10 118253259 to 118255668 2409 + pseudogene predicted gene 9030
Gm32802 10 118258688 to 118261096 2408 + pseudogene predicted gene, 32802
Gm9035 10 118265972 to 118267637 1665 + pseudogene predicted gene 9035
Iltifb 10 118289629 to 118295038 5409 - protein coding gene interleukin 10-related T cell-derived inducible factor beta
Gm9040 10 118324561 to 118326969 2408 - pseudogene predicted gene 9040
Gm9044 10 118330000 to 118332408 2408 - pseudogene predicted gene 9044
Gm9045 10 118335423 to 118337831 2408 - pseudogene predicted gene 9045
Gm9046 10 118340847 to 118343255 2408 - pseudogene predicted gene 9046
Gm9048 10 118346271 to 118348679 2408 - pseudogene predicted gene 9048
Gm9049 10 118351697 to 118354105 2408 - pseudogene predicted gene 9049
D10Mit24 10 118439249 to 118439390 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 24
Tssr95949 10 118441044 to 118441050 6 + TSS region transcription start site region 95949
Ifng 10 118441046 to 118445892 4846 + protein coding gene interferon gamma
Gm49751 10 118441419 to 118444140 2721 + unclassified gene predicted gene, 49751
Ifngas1 10 118502035 to 118556525 54490 - antisense lncRNA gene Ifng antisense RNA 1
D10Mit74 10 118553765 to 118553963 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 74
Tmevp3 10 118553765 to 118655063 101298 QTL Theiler's murine encephalomyelitis virus persistence 3
Tssr99499 10 118556526 to 118556542 16 - TSS region transcription start site region 99499
Tssr99500 10 118633443 to 118633447 4 - TSS region transcription start site region 99500
Tssr99501 10 118633485 to 118633508 23 - TSS region transcription start site region 99501
Tssr95950 10 118633748 to 118633775 27 + TSS region transcription start site region 95950
D10Mit234 10 118654934 to 118655063 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 234
Cfmq3 10 118661259 to 118661448 189 QTL cystic fibrosis modifier QTL 3
D10Mit14 10 118661259 to 118661448 189 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 14
Im5 10 118661259 to 118661448 189 QTL immunoregulatory 5
Jckm1 10 118661259 to 120899582 2238323 QTL juvenile cystic kidney modifier 1
Cia29 10 118661448 to 85619118 -33042330 QTL collagen induced arthritis QTL 29
Cpgi2249 10 118676058 to 118676264 206 CpG island CpG island 2249
Tssr95951 10 118714436 to 118714453 17 + TSS region transcription start site region 95951
Gm33337 10 118714481 to 118715726 1245 - lincRNA gene predicted gene, 33337
Tssr99502 10 118715760 to 118715779 19 - TSS region transcription start site region 99502
Tssr95952 10 118715887 to 118715927 40 + TSS region transcription start site region 95952
Gm47425 10 118718146 to 118719428 1282 - lincRNA gene predicted gene, 47425
Gm33439 10 118746703 to 118785158 38455 + lncRNA gene predicted gene, 33439
Gm33481 10 118792223 to 118793228 1005 + lncRNA gene predicted gene, 33481
Tssr99503 10 118796634 to 118796695 61 - TSS region transcription start site region 99503
Cpgi2250 10 118803241 to 118803468 227 CpG island CpG island 2250
Gm4065 10 118803719 to 118805290 1571 - lincRNA gene predicted gene 4065
Gm47434 10 118832588 to 118835106 2518 - unclassified gene predicted gene, 47434
Gm40776 10 118846082 to 118849132 3050 + lncRNA gene predicted gene, 40776
Dyrk2 10 118855603 to 118870209 14606 - protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
Tssr99504 10 118855864 to 118855913 49 - TSS region transcription start site region 99504
Cpgi2251 10 118859683 to 118860805 1122 CpG island CpG island 2251
4932442E05Rik 10 118860826 to 118863542 2716 + protein coding gene RIKEN cDNA 4932442E05 gene
Tssr95953 10 118866125 to 118866130 5 + TSS region transcription start site region 95953
Cpgi2252 10 118867745 to 118870178 2433 CpG island CpG island 2252
Tssr99505 10 118868777 to 118868792 15 - TSS region transcription start site region 99505
Tssr99506 10 118869126 to 118869154 28 - TSS region transcription start site region 99506
Tssr99507 10 118869159 to 118869185 26 - TSS region transcription start site region 99507
Tssr99508 10 118869793 to 118869805 12 - TSS region transcription start site region 99508
Tssr95954 10 118869961 to 118869976 15 + TSS region transcription start site region 95954
Gm40777 10 118871777 to 118882341 10564 + lncRNA gene predicted gene, 40777
Gm10744 10 118880949 to 118883654 2705 - unclassified gene predicted gene 10744
Tssr99509 10 118889241 to 118889255 14 - TSS region transcription start site region 99509
Tssr99510 10 118889256 to 118889266 10 - TSS region transcription start site region 99510
Gm26976 10 118892911 to 118893818 907 + pseudogene predicted gene, 26976
Gm38403 10 118920381 to 118927143 6762 - lincRNA gene predicted gene, 38403
Tssr99511 10 118924810 to 118924811 1 - TSS region transcription start site region 99511