Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:118091046-118795892

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Hylaq3 10 111732321 to 118150744 6418423 QTL Hyperlocomotor activity related QTL 3
Tssr99496 10 118097963 to 118097967 4 - TSS region transcription start site region 99496
Tssr95934 10 118098176 to 118098202 26 + TSS region transcription start site region 95934
Tssr95935 10 118098249 to 118098251 2 + TSS region transcription start site region 95935
Tssr95936 10 118098270 to 118098281 11 + TSS region transcription start site region 95936
Tssr3367 10 118101961 to 118101970 9 + TSS region transcription start site region 3367
Cpgi2246 10 118103198 to 118103489 291 CpG island CpG island 2246
Tssr99497 10 118103241 to 118103282 41 - TSS region transcription start site region 99497
Tssr3368 10 118107307 to 118107310 3 + TSS region transcription start site region 3368
Tssr95937 10 118112514 to 118112531 17 + TSS region transcription start site region 95937
5330439M10Rik 10 118112517 to 118124094 11577 + lincRNA gene RIKEN cDNA 5330439M10 gene
Cpgi2247 10 118126083 to 118126241 158 CpG island CpG island 2247
Cpgi2248 10 118141398 to 118142441 1043 CpG island CpG island 2248
Tssr95938 10 118141523 to 118141528 5 + TSS region transcription start site region 95938
Tssr95939 10 118141531 to 118141533 2 + TSS region transcription start site region 95939
Tssr95940 10 118141548 to 118141559 11 + TSS region transcription start site region 95940
Tssr95941 10 118141560 to 118141565 5 + TSS region transcription start site region 95941
Tssr99498 10 118141565 to 118141610 45 - TSS region transcription start site region 99498
Tssr95942 10 118141802 to 118141870 68 + TSS region transcription start site region 95942
Mdm1 10 118141811 to 118168997 27186 + protein coding gene transformed mouse 3T3 cell double minute 1
Tssr95943 10 118141885 to 118141898 13 + TSS region transcription start site region 95943
Tssr95944 10 118141903 to 118141912 9 + TSS region transcription start site region 95944
Tssr95945 10 118141917 to 118141928 11 + TSS region transcription start site region 95945
Estq4 10 118150611 to 118150744 133 QTL estradiol regulated response QTL 4
Cfbw4 10 118150611 to 118150744 133 QTL cystic fibrosis body weight 4
D10Mit180 10 118150611 to 118150744 133 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 180
Gn 10 118150744 to 18383585 -99767159 heritable phenotypic marker gentoo
Tssr95946 10 118156108 to 118156112 4 + TSS region transcription start site region 95946
Tssr3369 10 118156597 to 118156599 2 + TSS region transcription start site region 3369
Gm47958 10 118163985 to 118165162 1177 - antisense lncRNA gene predicted gene, 47958
Gm40775 10 118188087 to 118189210 1123 - lncRNA gene predicted gene, 40775
Tssr95947 10 118204822 to 118204827 5 + TSS region transcription start site region 95947
Il22 10 118204942 to 118210047 5105 + protein coding gene interleukin 22
Gm9585 10 118232128 to 118233531 1403 - pseudogene predicted gene 9585
Gm32717 10 118238372 to 118240780 2408 - pseudogene predicted gene, 32717
Gm9029 10 118243800 to 118246209 2409 - pseudogene predicted gene 9029
Tssr95948 10 118253140 to 118253151 11 + TSS region transcription start site region 95948
Gm9030 10 118253259 to 118255668 2409 + pseudogene predicted gene 9030
Gm32802 10 118258688 to 118261096 2408 + pseudogene predicted gene, 32802
Gm9035 10 118265972 to 118267637 1665 + pseudogene predicted gene 9035
Iltifb 10 118289629 to 118295038 5409 - protein coding gene interleukin 10-related T cell-derived inducible factor beta
Gm9040 10 118324561 to 118326969 2408 - pseudogene predicted gene 9040
Gm9044 10 118330000 to 118332408 2408 - pseudogene predicted gene 9044
Gm9045 10 118335423 to 118337831 2408 - pseudogene predicted gene 9045
Gm9046 10 118340847 to 118343255 2408 - pseudogene predicted gene 9046
Gm9048 10 118346271 to 118348679 2408 - pseudogene predicted gene 9048
Gm9049 10 118351697 to 118354105 2408 - pseudogene predicted gene 9049
D10Mit24 10 118439249 to 118439390 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 24
Tssr95949 10 118441044 to 118441050 6 + TSS region transcription start site region 95949
Ifng 10 118441046 to 118445892 4846 + protein coding gene interferon gamma
Gm49751 10 118441419 to 118444140 2721 + unclassified gene predicted gene, 49751
Ifngas1 10 118502035 to 118556525 54490 - antisense lncRNA gene Ifng antisense RNA 1
Tmevp3 10 118553765 to 118655063 101298 QTL Theiler's murine encephalomyelitis virus persistence 3
D10Mit74 10 118553765 to 118553963 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 74
Tssr99499 10 118556526 to 118556542 16 - TSS region transcription start site region 99499
Tssr99500 10 118633443 to 118633447 4 - TSS region transcription start site region 99500
Tssr99501 10 118633485 to 118633508 23 - TSS region transcription start site region 99501
Tssr95950 10 118633748 to 118633775 27 + TSS region transcription start site region 95950
D10Mit234 10 118654934 to 118655063 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 234
Jckm1 10 118661259 to 120899582 2238323 QTL juvenile cystic kidney modifier 1
Cfmq3 10 118661259 to 118661448 189 QTL cystic fibrosis modifier QTL 3
D10Mit14 10 118661259 to 118661448 189 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 14
Im5 10 118661259 to 118661448 189 QTL immunoregulatory 5
Cia29 10 118661448 to 85619118 -33042330 QTL collagen induced arthritis QTL 29
Cpgi2249 10 118676058 to 118676264 206 CpG island CpG island 2249
Tssr95951 10 118714436 to 118714453 17 + TSS region transcription start site region 95951
Gm33337 10 118714481 to 118715726 1245 - lincRNA gene predicted gene, 33337
Tssr99502 10 118715760 to 118715779 19 - TSS region transcription start site region 99502
Tssr95952 10 118715887 to 118715927 40 + TSS region transcription start site region 95952
Gm47425 10 118718146 to 118719428 1282 - lincRNA gene predicted gene, 47425
Gm33439 10 118746703 to 118785158 38455 + lncRNA gene predicted gene, 33439
Gm33481 10 118792223 to 118793228 1005 + lncRNA gene predicted gene, 33481