Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117829991-118090091

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rap1b 10 117814597 to 117845974 31377 - protein coding gene RAS related protein 1b
Tssr99486 10 117835328 to 117835335 7 - TSS region transcription start site region 99486
Tssr99487 10 117844314 to 117844322 8 - TSS region transcription start site region 99487
Tssr99488 10 117845087 to 117845094 7 - TSS region transcription start site region 99488
Cpgi2241 10 117845153 to 117846570 1417 CpG island CpG island 2241
Tssr99489 10 117845938 to 117845949 11 - TSS region transcription start site region 99489
Tssr99490 10 117845959 to 117846009 50 - TSS region transcription start site region 99490
Tssr95930 10 117846120 to 117846170 50 + TSS region transcription start site region 95930
Tssr95931 10 117861136 to 117861163 27 + TSS region transcription start site region 95931
Gm40773 10 117864670 to 117868075 3405 + lincRNA gene predicted gene, 40773
Gm32552 10 117866184 to 117866720 536 - lincRNA gene predicted gene, 32552
Gm32605 10 117876559 to 117911460 34901 + lncRNA gene predicted gene, 32605
Cpgi2242 10 117905759 to 117906005 246 CpG island CpG island 2242
Tssr99491 10 117910511 to 117910516 5 - TSS region transcription start site region 99491
4933411E08Rik 10 117925459 to 117948292 22833 + lincRNA gene RIKEN cDNA 4933411E08 gene
Cpgi2243 10 117926082 to 117926341 259 CpG island CpG island 2243
Tssr3366 10 117941207 to 117941232 25 + TSS region transcription start site region 3366
Cpgi2244 10 117952121 to 117952534 413 CpG island CpG island 2244
D10Mit304 10 117959991 to 117960091 100 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 304
Tssr99492 10 117982631 to 117982655 24 - TSS region transcription start site region 99492
Tssr95932 10 117982902 to 117982908 6 + TSS region transcription start site region 95932
Gm37852 10 118004938 to 118005287 349 + unclassified gene predicted gene, 37852
Tssr99493 10 118011950 to 118011954 4 - TSS region transcription start site region 99493
Gm32663 10 118013133 to 118053072 39939 + lncRNA gene predicted gene, 32663
Cpgi2245 10 118052331 to 118052908 577 CpG island CpG island 2245
Tssr95933 10 118052912 to 118052918 6 + TSS region transcription start site region 95933
Tssr99494 10 118082947 to 118082957 10 - TSS region transcription start site region 99494
Tssr99495 10 118083055 to 118083090 35 - TSS region transcription start site region 99495