Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117726082-118126341

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc35e3 10 117733678 to 117746358 12680 - protein coding gene solute carrier family 35, member E3
Cpgi2238 10 117745593 to 117745785 192 CpG island CpG island 2238
Cpgi2239 10 117746296 to 117746655 359 CpG island CpG island 2239
Tssr99471 10 117746331 to 117746350 19 - TSS region transcription start site region 99471
Tssr99472 10 117746356 to 117746418 62 - TSS region transcription start site region 99472
Nup107 10 117750621 to 117792705 42084 - protein coding gene nucleoporin 107
Tssr99473 10 117779222 to 117779260 38 - TSS region transcription start site region 99473
Cpgi2240 10 117792250 to 117793085 835 CpG island CpG island 2240
Tssr99474 10 117792638 to 117792658 20 - TSS region transcription start site region 99474
Tssr99475 10 117792663 to 117792717 54 - TSS region transcription start site region 99475
Tssr95929 10 117792955 to 117793004 49 + TSS region transcription start site region 95929
Gm47899 10 117798459 to 117798765 306 - pseudogene predicted gene, 47899
Rap1b 10 117814597 to 117845974 31377 - protein coding gene RAS related protein 1b
Tssr99476 10 117814910 to 117814924 14 - TSS region transcription start site region 99476
Tssr99477 10 117815063 to 117815076 13 - TSS region transcription start site region 99477
Tssr99478 10 117815291 to 117815304 13 - TSS region transcription start site region 99478
Tssr99479 10 117815565 to 117815581 16 - TSS region transcription start site region 99479
Tssr99480 10 117815667 to 117815685 18 - TSS region transcription start site region 99480
Tssr99481 10 117815687 to 117815698 11 - TSS region transcription start site region 99481
Tssr99482 10 117815978 to 117815985 7 - TSS region transcription start site region 99482
Tssr99483 10 117817371 to 117817422 51 - TSS region transcription start site region 99483
Tssr99484 10 117818576 to 117818593 17 - TSS region transcription start site region 99484
Tssr99485 10 117820529 to 117820566 37 - TSS region transcription start site region 99485
Tssr99486 10 117835328 to 117835335 7 - TSS region transcription start site region 99486
Tssr99487 10 117844314 to 117844322 8 - TSS region transcription start site region 99487
Tssr99488 10 117845087 to 117845094 7 - TSS region transcription start site region 99488
Cpgi2241 10 117845153 to 117846570 1417 CpG island CpG island 2241
Tssr99489 10 117845938 to 117845949 11 - TSS region transcription start site region 99489
Tssr99490 10 117845959 to 117846009 50 - TSS region transcription start site region 99490
Tssr95930 10 117846120 to 117846170 50 + TSS region transcription start site region 95930
Tssr95931 10 117861136 to 117861163 27 + TSS region transcription start site region 95931
Gm40773 10 117864670 to 117868075 3405 + lincRNA gene predicted gene, 40773
Gm32552 10 117866184 to 117866720 536 - lincRNA gene predicted gene, 32552
Gm32605 10 117876559 to 117911460 34901 + lncRNA gene predicted gene, 32605
Cpgi2242 10 117905759 to 117906005 246 CpG island CpG island 2242
Tssr99491 10 117910511 to 117910516 5 - TSS region transcription start site region 99491
4933411E08Rik 10 117925459 to 117948292 22833 + lincRNA gene RIKEN cDNA 4933411E08 gene
Cpgi2243 10 117926082 to 117926341 259 CpG island CpG island 2243
Tssr3366 10 117941207 to 117941232 25 + TSS region transcription start site region 3366
Cpgi2244 10 117952121 to 117952534 413 CpG island CpG island 2244
D10Mit304 10 117959991 to 117960091 100 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 304
Tssr99492 10 117982631 to 117982655 24 - TSS region transcription start site region 99492
Tssr95932 10 117982902 to 117982908 6 + TSS region transcription start site region 95932
Gm37852 10 118004938 to 118005287 349 + unclassified gene predicted gene, 37852
Tssr99493 10 118011950 to 118011954 4 - TSS region transcription start site region 99493
Gm32663 10 118013133 to 118053072 39939 + lncRNA gene predicted gene, 32663
Cpgi2245 10 118052331 to 118052908 577 CpG island CpG island 2245
Tssr95933 10 118052912 to 118052918 6 + TSS region transcription start site region 95933
Tssr99494 10 118082947 to 118082957 10 - TSS region transcription start site region 99494
Tssr99495 10 118083055 to 118083090 35 - TSS region transcription start site region 99495
Tssr99496 10 118097963 to 118097967 4 - TSS region transcription start site region 99496
Tssr95934 10 118098176 to 118098202 26 + TSS region transcription start site region 95934
Tssr95935 10 118098249 to 118098251 2 + TSS region transcription start site region 95935
Tssr95936 10 118098270 to 118098281 11 + TSS region transcription start site region 95936
Tssr3367 10 118101961 to 118101970 9 + TSS region transcription start site region 3367
Cpgi2246 10 118103198 to 118103489 291 CpG island CpG island 2246
Tssr99497 10 118103241 to 118103282 41 - TSS region transcription start site region 99497
Tssr3368 10 118107307 to 118107310 3 + TSS region transcription start site region 3368
Tssr95937 10 118112514 to 118112531 17 + TSS region transcription start site region 95937
5330439M10Rik 10 118112517 to 118124094 11577 + lincRNA gene RIKEN cDNA 5330439M10 gene
Cpgi2247 10 118126083 to 118126241 158 CpG island CpG island 2247