Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117280778-117472275

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lyz2 10 117277541 to 117282272 4731 - protein coding gene lysozyme 2
Tssr99425 10 117280780 to 117280815 35 - TSS region transcription start site region 99425
Tssr99426 10 117281002 to 117281005 3 - TSS region transcription start site region 99426
Tssr99427 10 117282243 to 117282257 14 - TSS region transcription start site region 99427
Tssr99428 10 117282262 to 117282280 18 - TSS region transcription start site region 99428
Tssr99429 10 117282322 to 117282327 5 - TSS region transcription start site region 99429
Tssr99430 10 117282329 to 117282367 38 - TSS region transcription start site region 99430
Tssr99431 10 117282385 to 117282393 8 - TSS region transcription start site region 99431
Tssr99432 10 117282432 to 117282441 9 - TSS region transcription start site region 99432
Tssr95916 10 117285199 to 117285229 30 + TSS region transcription start site region 95916
Tssr95917 10 117285284 to 117285302 18 + TSS region transcription start site region 95917
Lyz1 10 117287797 to 117292868 5071 - protein coding gene lysozyme 1
Tssr3364 10 117287848 to 117287881 33 + TSS region transcription start site region 3364
Tssr99433 10 117288410 to 117288420 10 - TSS region transcription start site region 99433
Tssr99434 10 117288492 to 117288526 34 - TSS region transcription start site region 99434
Tssr99435 10 117292863 to 117292870 7 - TSS region transcription start site region 99435
D10Mit179 10 117295828 to 117295977 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 179
Tssr99436 10 117339747 to 117339750 3 - TSS region transcription start site region 99436
Cpsf6 10 117344667 to 117376990 32323 - protein coding gene cleavage and polyadenylation specific factor 6
Tssr99437 10 117348241 to 117348246 5 - TSS region transcription start site region 99437
Tssr99438 10 117350882 to 117350887 5 - TSS region transcription start site region 99438
Tssr99439 10 117357115 to 117357118 3 - TSS region transcription start site region 99439
Tssr99440 10 117360961 to 117360972 11 - TSS region transcription start site region 99440
Tssr99441 10 117361046 to 117361063 17 - TSS region transcription start site region 99441
Tssr3365 10 117361076 to 117361115 39 - TSS region transcription start site region 3365
Tssr99442 10 117361177 to 117361188 11 - TSS region transcription start site region 99442
Cpgi2229 10 117375778 to 117377275 1497 CpG island CpG island 2229
Tssr99443 10 117376906 to 117376917 11 - TSS region transcription start site region 99443
Tssr99444 10 117376922 to 117376954 32 - TSS region transcription start site region 99444
Tssr99445 10 117376955 to 117376978 23 - TSS region transcription start site region 99445
Tssr99446 10 117380038 to 117380051 13 - TSS region transcription start site region 99446
Cpgi2230 10 117389792 to 117390219 427 CpG island CpG island 2230
Gm48903 10 117390022 to 117398587 8565 + lincRNA gene predicted gene, 48903
Gm40770 10 117408872 to 117413904 5032 - lincRNA gene predicted gene, 40770
Tssr99447 10 117411244 to 117411265 21 - TSS region transcription start site region 99447
Tssr99448 10 117413906 to 117413917 11 - TSS region transcription start site region 99448
Cpgi2231 10 117418734 to 117419080 346 CpG island CpG island 2231
Gm9002 10 117429618 to 117430116 498 + pseudogene predicted gene 9002
Cpgi2232 10 117435345 to 117435789 444 CpG island CpG island 2232
Gm32141 10 117446017 to 117447487 1470 - lincRNA gene predicted gene, 32141