Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117271244-117551265

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D10Mit296 10 117272444 to 117272568 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 296
Tssr95904 10 117277329 to 117277340 11 + TSS region transcription start site region 95904
Tssr95905 10 117277385 to 117277408 23 + TSS region transcription start site region 95905
Tssr99410 10 117277430 to 117277452 22 - TSS region transcription start site region 99410
Tssr95906 10 117277447 to 117277462 15 + TSS region transcription start site region 95906
Tssr95907 10 117277464 to 117277495 31 + TSS region transcription start site region 95907
Tssr99411 10 117277482 to 117277530 48 - TSS region transcription start site region 99411
Lyz2 10 117277541 to 117282272 4731 - protein coding gene lysozyme 2
Tssr99412 10 117277603 to 117277636 33 - TSS region transcription start site region 99412
Tssr95908 10 117277640 to 117277676 36 + TSS region transcription start site region 95908
Tssr99413 10 117277664 to 117277689 25 - TSS region transcription start site region 99413
Tssr95909 10 117277716 to 117277766 50 + TSS region transcription start site region 95909
Tssr99414 10 117277753 to 117277803 50 - TSS region transcription start site region 99414
Tssr99415 10 117277836 to 117277863 27 - TSS region transcription start site region 99415
Tssr95910 10 117277851 to 117277912 61 + TSS region transcription start site region 95910
Tssr99416 10 117277886 to 117277930 44 - TSS region transcription start site region 99416
Tssr95911 10 117277981 to 117278020 39 + TSS region transcription start site region 95911
Tssr99417 10 117277998 to 117278005 7 - TSS region transcription start site region 99417
Tssr99418 10 117278012 to 117278024 12 - TSS region transcription start site region 99418
Tssr99419 10 117278027 to 117278062 35 - TSS region transcription start site region 99419
Tssr95912 10 117278076 to 117278091 15 + TSS region transcription start site region 95912
Tssr99420 10 117278099 to 117278120 21 - TSS region transcription start site region 99420
Tssr95913 10 117278136 to 117278168 32 + TSS region transcription start site region 95913
Tssr99421 10 117278173 to 117278196 23 - TSS region transcription start site region 99421
Tssr99422 10 117278905 to 117278918 13 - TSS region transcription start site region 99422
Tssr95914 10 117280634 to 117280667 33 + TSS region transcription start site region 95914
Tssr99423 10 117280667 to 117280704 37 - TSS region transcription start site region 99423
Tssr95915 10 117280712 to 117280732 20 + TSS region transcription start site region 95915
Tssr99424 10 117280735 to 117280766 31 - TSS region transcription start site region 99424
Tssr99425 10 117280780 to 117280815 35 - TSS region transcription start site region 99425
Tssr99426 10 117281002 to 117281005 3 - TSS region transcription start site region 99426
Tssr99427 10 117282243 to 117282257 14 - TSS region transcription start site region 99427
Tssr99428 10 117282262 to 117282280 18 - TSS region transcription start site region 99428
Tssr99429 10 117282322 to 117282327 5 - TSS region transcription start site region 99429
Tssr99430 10 117282329 to 117282367 38 - TSS region transcription start site region 99430
Tssr99431 10 117282385 to 117282393 8 - TSS region transcription start site region 99431
Tssr99432 10 117282432 to 117282441 9 - TSS region transcription start site region 99432
Tssr95916 10 117285199 to 117285229 30 + TSS region transcription start site region 95916
Tssr95917 10 117285284 to 117285302 18 + TSS region transcription start site region 95917
Lyz1 10 117287797 to 117292868 5071 - protein coding gene lysozyme 1
Tssr3364 10 117287848 to 117287881 33 + TSS region transcription start site region 3364
Tssr99433 10 117288410 to 117288420 10 - TSS region transcription start site region 99433
Tssr99434 10 117288492 to 117288526 34 - TSS region transcription start site region 99434
Tssr99435 10 117292863 to 117292870 7 - TSS region transcription start site region 99435
D10Mit179 10 117295828 to 117295977 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 179
Tssr99436 10 117339747 to 117339750 3 - TSS region transcription start site region 99436
Cpsf6 10 117344667 to 117376990 32323 - protein coding gene cleavage and polyadenylation specific factor 6
Tssr99437 10 117348241 to 117348246 5 - TSS region transcription start site region 99437
Tssr99438 10 117350882 to 117350887 5 - TSS region transcription start site region 99438
Tssr99439 10 117357115 to 117357118 3 - TSS region transcription start site region 99439
Tssr99440 10 117360961 to 117360972 11 - TSS region transcription start site region 99440
Tssr99441 10 117361046 to 117361063 17 - TSS region transcription start site region 99441
Tssr3365 10 117361076 to 117361115 39 - TSS region transcription start site region 3365
Tssr99442 10 117361177 to 117361188 11 - TSS region transcription start site region 99442
Cpgi2229 10 117375778 to 117377275 1497 CpG island CpG island 2229
Tssr99443 10 117376906 to 117376917 11 - TSS region transcription start site region 99443
Tssr99444 10 117376922 to 117376954 32 - TSS region transcription start site region 99444
Tssr99445 10 117376955 to 117376978 23 - TSS region transcription start site region 99445
Tssr99446 10 117380038 to 117380051 13 - TSS region transcription start site region 99446
Cpgi2230 10 117389792 to 117390219 427 CpG island CpG island 2230
Gm48903 10 117390022 to 117398587 8565 + lincRNA gene predicted gene, 48903
Gm40770 10 117408872 to 117413904 5032 - lincRNA gene predicted gene, 40770
Tssr99447 10 117411244 to 117411265 21 - TSS region transcription start site region 99447
Tssr99448 10 117413906 to 117413917 11 - TSS region transcription start site region 99448
Cpgi2231 10 117418734 to 117419080 346 CpG island CpG island 2231
Gm9002 10 117429618 to 117430116 498 + pseudogene predicted gene 9002
Cpgi2232 10 117435345 to 117435789 444 CpG island CpG island 2232
Gm32141 10 117446017 to 117447487 1470 - lincRNA gene predicted gene, 32141
Tssr95918 10 117531038 to 117531045 7 + TSS region transcription start site region 95918