Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117189618-117670116

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110 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930528J18Rik 10 117189847 to 117190266 419 unclassified gene RIKEN cDNA 4930528J18 gene
Tssr99393 10 117190261 to 117190278 17 - TSS region transcription start site region 99393
Yeats4 10 117215221 to 117224507 9286 - protein coding gene YEATS domain containing 4
Tssr99394 10 117215843 to 117215852 9 - TSS region transcription start site region 99394
Tssr99395 10 117217336 to 117217362 26 - TSS region transcription start site region 99395
Cpgi2227 10 117223847 to 117224804 957 CpG island CpG island 2227
Tssr95900 10 117224246 to 117224268 22 + TSS region transcription start site region 95900
Tssr99396 10 117224480 to 117224499 19 - TSS region transcription start site region 99396
Gm31963 10 117224486 to 117250831 26345 + lncRNA gene predicted gene, 31963
Gm48772 10 117224589 to 117224952 363 + bidirectional promoter lncRNA gene predicted gene, 48772
Cpgi2228 10 117229930 to 117230186 256 CpG island CpG island 2228
9530003J23Rik 10 117233753 to 117238681 4928 - protein coding gene RIKEN cDNA 9530003J23 gene
Tssr99397 10 117234021 to 117234027 6 - TSS region transcription start site region 99397
Tssr99398 10 117234044 to 117234051 7 - TSS region transcription start site region 99398
Tssr99399 10 117234055 to 117234058 3 - TSS region transcription start site region 99399
Tssr99400 10 117234201 to 117234249 48 - TSS region transcription start site region 99400
Tssr99401 10 117234302 to 117234310 8 - TSS region transcription start site region 99401
Tssr99402 10 117234422 to 117234431 9 - TSS region transcription start site region 99402
Tssr99403 10 117238540 to 117238559 19 - TSS region transcription start site region 99403
Tssr99404 10 117238573 to 117238582 9 - TSS region transcription start site region 99404
Tssr99405 10 117238589 to 117238614 25 - TSS region transcription start site region 99405
Tssr99406 10 117238630 to 117238641 11 - TSS region transcription start site region 99406
Tssr99407 10 117238647 to 117238654 7 - TSS region transcription start site region 99407
Tssr99408 10 117238665 to 117238676 11 - TSS region transcription start site region 99408
Tssr99409 10 117238865 to 117238897 32 - TSS region transcription start site region 99409
Tssr95901 10 117247938 to 117247948 10 + TSS region transcription start site region 95901
Tssr95902 10 117247981 to 117247992 11 + TSS region transcription start site region 95902
Gm10936 10 117248021 to 117250727 2706 + pseudogene predicted gene 10936
Tssr95903 10 117268259 to 117268262 3 + TSS region transcription start site region 95903
D10Mit296 10 117272444 to 117272568 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 296
Tssr95904 10 117277329 to 117277340 11 + TSS region transcription start site region 95904
Tssr95905 10 117277385 to 117277408 23 + TSS region transcription start site region 95905
Tssr99410 10 117277430 to 117277452 22 - TSS region transcription start site region 99410
Tssr95906 10 117277447 to 117277462 15 + TSS region transcription start site region 95906
Tssr95907 10 117277464 to 117277495 31 + TSS region transcription start site region 95907
Tssr99411 10 117277482 to 117277530 48 - TSS region transcription start site region 99411
Lyz2 10 117277541 to 117282272 4731 - protein coding gene lysozyme 2
Tssr99412 10 117277603 to 117277636 33 - TSS region transcription start site region 99412
Tssr95908 10 117277640 to 117277676 36 + TSS region transcription start site region 95908
Tssr99413 10 117277664 to 117277689 25 - TSS region transcription start site region 99413
Tssr95909 10 117277716 to 117277766 50 + TSS region transcription start site region 95909
Tssr99414 10 117277753 to 117277803 50 - TSS region transcription start site region 99414
Tssr99415 10 117277836 to 117277863 27 - TSS region transcription start site region 99415
Tssr95910 10 117277851 to 117277912 61 + TSS region transcription start site region 95910
Tssr99416 10 117277886 to 117277930 44 - TSS region transcription start site region 99416
Tssr95911 10 117277981 to 117278020 39 + TSS region transcription start site region 95911
Tssr99417 10 117277998 to 117278005 7 - TSS region transcription start site region 99417
Tssr99418 10 117278012 to 117278024 12 - TSS region transcription start site region 99418
Tssr99419 10 117278027 to 117278062 35 - TSS region transcription start site region 99419
Tssr95912 10 117278076 to 117278091 15 + TSS region transcription start site region 95912
Tssr99420 10 117278099 to 117278120 21 - TSS region transcription start site region 99420
Tssr95913 10 117278136 to 117278168 32 + TSS region transcription start site region 95913
Tssr99421 10 117278173 to 117278196 23 - TSS region transcription start site region 99421
Tssr99422 10 117278905 to 117278918 13 - TSS region transcription start site region 99422
Tssr95914 10 117280634 to 117280667 33 + TSS region transcription start site region 95914
Tssr99423 10 117280667 to 117280704 37 - TSS region transcription start site region 99423
Tssr95915 10 117280712 to 117280732 20 + TSS region transcription start site region 95915
Tssr99424 10 117280735 to 117280766 31 - TSS region transcription start site region 99424
Tssr99425 10 117280780 to 117280815 35 - TSS region transcription start site region 99425
Tssr99426 10 117281002 to 117281005 3 - TSS region transcription start site region 99426
Tssr99427 10 117282243 to 117282257 14 - TSS region transcription start site region 99427
Tssr99428 10 117282262 to 117282280 18 - TSS region transcription start site region 99428
Tssr99429 10 117282322 to 117282327 5 - TSS region transcription start site region 99429
Tssr99430 10 117282329 to 117282367 38 - TSS region transcription start site region 99430
Tssr99431 10 117282385 to 117282393 8 - TSS region transcription start site region 99431
Tssr99432 10 117282432 to 117282441 9 - TSS region transcription start site region 99432
Tssr95916 10 117285199 to 117285229 30 + TSS region transcription start site region 95916
Tssr95917 10 117285284 to 117285302 18 + TSS region transcription start site region 95917
Lyz1 10 117287797 to 117292868 5071 - protein coding gene lysozyme 1
Tssr3364 10 117287848 to 117287881 33 + TSS region transcription start site region 3364
Tssr99433 10 117288410 to 117288420 10 - TSS region transcription start site region 99433
Tssr99434 10 117288492 to 117288526 34 - TSS region transcription start site region 99434
Tssr99435 10 117292863 to 117292870 7 - TSS region transcription start site region 99435
D10Mit179 10 117295828 to 117295977 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 179
Tssr99436 10 117339747 to 117339750 3 - TSS region transcription start site region 99436
Cpsf6 10 117344667 to 117376990 32323 - protein coding gene cleavage and polyadenylation specific factor 6
Tssr99437 10 117348241 to 117348246 5 - TSS region transcription start site region 99437
Tssr99438 10 117350882 to 117350887 5 - TSS region transcription start site region 99438
Tssr99439 10 117357115 to 117357118 3 - TSS region transcription start site region 99439
Tssr99440 10 117360961 to 117360972 11 - TSS region transcription start site region 99440
Tssr99441 10 117361046 to 117361063 17 - TSS region transcription start site region 99441
Tssr3365 10 117361076 to 117361115 39 - TSS region transcription start site region 3365
Tssr99442 10 117361177 to 117361188 11 - TSS region transcription start site region 99442
Cpgi2229 10 117375778 to 117377275 1497 CpG island CpG island 2229
Tssr99443 10 117376906 to 117376917 11 - TSS region transcription start site region 99443
Tssr99444 10 117376922 to 117376954 32 - TSS region transcription start site region 99444
Tssr99445 10 117376955 to 117376978 23 - TSS region transcription start site region 99445
Tssr99446 10 117380038 to 117380051 13 - TSS region transcription start site region 99446
Cpgi2230 10 117389792 to 117390219 427 CpG island CpG island 2230
Gm48903 10 117390022 to 117398587 8565 + lincRNA gene predicted gene, 48903
Gm40770 10 117408872 to 117413904 5032 - lincRNA gene predicted gene, 40770
Tssr99447 10 117411244 to 117411265 21 - TSS region transcription start site region 99447
Tssr99448 10 117413906 to 117413917 11 - TSS region transcription start site region 99448
Cpgi2231 10 117418734 to 117419080 346 CpG island CpG island 2231
Gm9002 10 117429618 to 117430116 498 + pseudogene predicted gene 9002
Cpgi2232 10 117435345 to 117435789 444 CpG island CpG island 2232
Gm32141 10 117446017 to 117447487 1470 - lincRNA gene predicted gene, 32141
Tssr95918 10 117531038 to 117531045 7 + TSS region transcription start site region 95918
Gm32235 10 117559133 to 117560228 1095 + lincRNA gene predicted gene, 32235
Gm9004 10 117588117 to 117588872 755 - pseudogene predicted gene 9004
Cpgi2233 10 117594057 to 117594318 261 CpG island CpG island 2233
Kifc5c-ps 10 117594353 to 117595882 1529 + pseudogene kinesin family member C5C, pseudogene
Gm32319 10 117604027 to 117608259 4232 - lncRNA gene predicted gene, 32319
Cpgi2234 10 117608228 to 117608514 286 CpG island CpG island 2234
Gm32365 10 117614574 to 117616661 2087 + lincRNA gene predicted gene, 32365
Cpgi2235 10 117628869 to 117630026 1157 CpG island CpG island 2235
Tssr95919 10 117629493 to 117629506 13 + TSS region transcription start site region 95919
Cpm 10 117629500 to 117687352 57852 + protein coding gene carboxypeptidase M
Cpgi2236 10 117639985 to 117640201 216 CpG island CpG island 2236
Gm25709 10 117662282 to 117662388 106 - snRNA gene predicted gene, 25709