MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:116963006-117023358

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4933412E12Rik	10	116950562 to 116963279	12717	+	bidirectional promoter lncRNA gene	RIKEN cDNA 4933412E12 gene
Gm10271	10	116956824 to 116972609	15785	-	protein coding gene	predicted gene 10271
Tssr95890	10	116964734 to 116964745	11	+	TSS region	transcription start site region 95890
D630029K05Rik	10	116964740 to 116969108	4368	+	lincRNA gene	RIKEN cDNA D630029K05 gene
Tssr95891	10	116964747 to 116964760	13	+	TSS region	transcription start site region 95891
Tssr95892	10	116964779 to 116964786	7	+	TSS region	transcription start site region 95892
Tssr95893	10	116964832 to 116964842	10	+	TSS region	transcription start site region 95893
Tssr95894	10	116966221 to 116966246	25	+	TSS region	transcription start site region 95894
Tssr95895	10	116966286 to 116966295	9	+	TSS region	transcription start site region 95895
Tssr95896	10	116966363 to 116966367	4	+	TSS region	transcription start site region 95896
Gm5781	10	116972766 to 116973208	442	-	pseudogene	predicted gene 5781
Tssr99380	10	116973221 to 116973231	10	-	TSS region	transcription start site region 99380
Gm46182	10	116983666 to 116986763	3097	-	lncRNA gene	predicted gene, 46182
Best3	10	116986314 to 117025040	38726	+	protein coding gene	bestrophin 3
Tssr95897	10	116986622 to 116986635	13	+	TSS region	transcription start site region 95897
Tssr95898	10	116986651 to 116986695	44	+	TSS region	transcription start site region 95898
Cpgi2219	10	116993006 to 116993358	352		CpG island	CpG island 2219
Cpgi2220	10	117004213 to 117004540	327		CpG island	CpG island 2220