Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:115693426-116343440

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr3360 10 115764035 to 115764036 1 + TSS region transcription start site region 3360
Tspan8 10 115816832 to 115849893 33061 + protein coding gene tetraspanin 8
Tssr95831 10 115817130 to 115817141 11 + TSS region transcription start site region 95831
Tssr3361 10 115817179 to 115817188 9 + TSS region transcription start site region 3361
Tssr95832 10 115817247 to 115817323 76 + TSS region transcription start site region 95832
Tssr95833 10 115817327 to 115817342 15 + TSS region transcription start site region 95833
Tssr95834 10 115817356 to 115817369 13 + TSS region transcription start site region 95834
Tssr95835 10 115817441 to 115817454 13 + TSS region transcription start site region 95835
Tssr95836 10 115817460 to 115817489 29 + TSS region transcription start site region 95836
Tssr95837 10 115817499 to 115817514 15 + TSS region transcription start site region 95837
Tssr95838 10 115817524 to 115817533 9 + TSS region transcription start site region 95838
Tssr95839 10 115833039 to 115833042 3 + TSS region transcription start site region 95839
Tssr95840 10 115846317 to 115846329 12 + TSS region transcription start site region 95840
4930422I22Rik 10 115849800 to 115869091 19291 - antisense lncRNA gene RIKEN cDNA 4930422I22 gene
Ptprr 10 116018213 to 116274932 256719 + protein coding gene protein tyrosine phosphatase, receptor type, R
Tssr95841 10 116018352 to 116018421 69 + TSS region transcription start site region 95841
Cpgi2210 10 116018364 to 116018793 429 CpG island CpG island 2210
Tssr95842 10 116018426 to 116018440 14 + TSS region transcription start site region 95842
Tssr95843 10 116018444 to 116018454 10 + TSS region transcription start site region 95843
Tssr99339 10 116098640 to 116098648 8 - TSS region transcription start site region 99339
Taf7l2 10 116111664 to 116113917 2253 - protein coding gene Taf7l2
Cpgi2211 10 116113312 to 116114405 1093 CpG island CpG island 2211
Tssr99340 10 116113874 to 116113880 6 - TSS region transcription start site region 99340
Tssr99341 10 116113889 to 116113933 44 - TSS region transcription start site region 99341
Tssr99342 10 116113934 to 116113941 7 - TSS region transcription start site region 99342
Tssr99343 10 116113944 to 116113949 5 - TSS region transcription start site region 99343
Tssr99344 10 116113952 to 116113957 5 - TSS region transcription start site region 99344
Tssr99345 10 116114241 to 116114263 22 - TSS region transcription start site region 99345
Tssr99346 10 116114264 to 116114279 15 - TSS region transcription start site region 99346
Tssr99347 10 116114283 to 116114299 16 - TSS region transcription start site region 99347
Tssr95844 10 116143881 to 116143902 21 + TSS region transcription start site region 95844
Tssr95845 10 116143910 to 116143922 12 + TSS region transcription start site region 95845
Tssr95846 10 116143942 to 116143952 10 + TSS region transcription start site region 95846
Tssr99348 10 116176962 to 116176968 6 - TSS region transcription start site region 99348
Tssr95847 10 116177217 to 116177243 26 + TSS region transcription start site region 95847
Tssr95848 10 116177393 to 116177417 24 + TSS region transcription start site region 95848
Tssr3362 10 116177423 to 116177434 11 + TSS region transcription start site region 3362
Tssr95849 10 116177683 to 116177700 17 + TSS region transcription start site region 95849
Tssr95850 10 116177702 to 116177763 61 + TSS region transcription start site region 95850
Tssr95851 10 116187685 to 116187688 3 + TSS region transcription start site region 95851
D10Mit101 10 116239444 to 116239563 119 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 101
Tssr95852 10 116252898 to 116252913 15 + TSS region transcription start site region 95852
Tssr95853 10 116275491 to 116275504 13 + TSS region transcription start site region 95853
Ptprb 10 116275523 to 116389535 114012 + protein coding gene protein tyrosine phosphatase, receptor type, B
Tssr95854 10 116275536 to 116275576 40 + TSS region transcription start site region 95854
Tssr95855 10 116275581 to 116275590 9 + TSS region transcription start site region 95855
Gm47625 10 116284549 to 116286343 1794 + unclassified gene predicted gene, 47625
Tssr95856 10 116289379 to 116289398 19 + TSS region transcription start site region 95856
Tssr99349 10 116297891 to 116297923 32 - TSS region transcription start site region 99349
Cpgi2212 10 116301236 to 116302056 820 CpG island CpG island 2212
Tssr95857 10 116301417 to 116301428 11 + TSS region transcription start site region 95857
Tssr95858 10 116301455 to 116301475 20 + TSS region transcription start site region 95858
Tssr95859 10 116301489 to 116301504 15 + TSS region transcription start site region 95859
Tssr95860 10 116310021 to 116310025 4 + TSS region transcription start site region 95860
Tssr95861 10 116315055 to 116315076 21 + TSS region transcription start site region 95861
Tssr95862 10 116325229 to 116325233 4 + TSS region transcription start site region 95862
Gm26495 10 116340583 to 116340719 136 + snoRNA gene predicted gene, 26495