Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:115372739-115802768

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thap2 10 115369966 to 115384435 14469 - protein coding gene THAP domain containing, apoptosis associated protein 2
Gm46180 10 115375104 to 115376345 1241 - lncRNA gene predicted gene, 46180
Tssr95813 10 115383917 to 115383950 33 + TSS region transcription start site region 95813
Cpgi2206 10 115384035 to 115386007 1972 CpG island CpG island 2206
Tssr99330 10 115384326 to 115384336 10 - TSS region transcription start site region 99330
Tssr99331 10 115384337 to 115384375 38 - TSS region transcription start site region 99331
Tssr99332 10 115384388 to 115384435 47 - TSS region transcription start site region 99332
Tssr99333 10 115384476 to 115384509 33 - TSS region transcription start site region 99333
Tssr99334 10 115384516 to 115384562 46 - TSS region transcription start site region 99334
Tssr99335 10 115384751 to 115384796 45 - TSS region transcription start site region 99335
Tssr95814 10 115384921 to 115384949 28 + TSS region transcription start site region 95814
Tssr95815 10 115384951 to 115385021 70 + TSS region transcription start site region 95815
Zfc3h1 10 115384959 to 115432772 47813 + protein coding gene zinc finger, C3H1-type containing
Tssr95816 10 115385045 to 115385057 12 + TSS region transcription start site region 95816
Tssr95817 10 115388929 to 115388937 8 + TSS region transcription start site region 95817
Tssr95818 10 115393492 to 115393499 7 + TSS region transcription start site region 95818
A130012E19Rik 10 115394750 to 115397884 3134 + unclassified gene RIKEN cDNA A130012E19 gene
Tssr95819 10 115401261 to 115401268 7 + TSS region transcription start site region 95819
Tssr95820 10 115408862 to 115408874 12 + TSS region transcription start site region 95820
Tssr95821 10 115411386 to 115411392 6 + TSS region transcription start site region 95821
Tssr95822 10 115422333 to 115422338 5 + TSS region transcription start site region 95822
Tssr95823 10 115427319 to 115427332 13 + TSS region transcription start site region 95823
Tssr95824 10 115430881 to 115430905 24 + TSS region transcription start site region 95824
Tssr95825 10 115430906 to 115430921 15 + TSS region transcription start site region 95825
Tssr95826 10 115430937 to 115430946 9 + TSS region transcription start site region 95826
Tssr95827 10 115431069 to 115431081 12 + TSS region transcription start site region 95827
Lgr5 10 115450314 to 115587780 137466 - protein coding gene leucine rich repeat containing G protein coupled receptor 5
Tssr95828 10 115452583 to 115452588 5 + TSS region transcription start site region 95828
Cpgi2207 10 115452715 to 115453054 339 CpG island CpG island 2207
Tssr99336 10 115505646 to 115505661 15 - TSS region transcription start site region 99336
Tssr3359 10 115556867 to 115556874 7 + TSS region transcription start site region 3359
Tssr99337 10 115569746 to 115569750 4 - TSS region transcription start site region 99337
A930009A15Rik 10 115569986 to 115582448 12462 + protein coding gene RIKEN cDNA A930009A15 gene
Tssr95829 10 115570009 to 115570035 26 + TSS region transcription start site region 95829
Tssr95830 10 115570041 to 115570055 14 + TSS region transcription start site region 95830
Cpgi2208 10 115586905 to 115588040 1135 CpG island CpG island 2208
Tssr99338 10 115587739 to 115587768 29 - TSS region transcription start site region 99338
Gm8960 10 115598984 to 115599788 804 - pseudogene predicted gene 8960
Cpgi2209 10 115664540 to 115664772 232 CpG island CpG island 2209
D10Mit100 10 115674572 to 115674687 115 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 100
Tssr3360 10 115764035 to 115764036 1 + TSS region transcription start site region 3360