Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:115345646-115665661

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem19 10 115340739 to 115362524 21785 - protein coding gene transmembrane protein 19
Gm19006 10 115354633 to 115355399 766 - pseudogene predicted gene, 19006
Tssr95810 10 115358761 to 115358795 34 + TSS region transcription start site region 95810
Tssr99324 10 115361870 to 115361876 6 - TSS region transcription start site region 99324
Cpgi2205 10 115362072 to 115362635 563 CpG island CpG island 2205
Tssr99325 10 115362152 to 115362163 11 - TSS region transcription start site region 99325
Tssr99326 10 115362177 to 115362184 7 - TSS region transcription start site region 99326
Tssr99327 10 115362191 to 115362255 64 - TSS region transcription start site region 99327
Tssr99328 10 115362475 to 115362497 22 - TSS region transcription start site region 99328
Tssr99329 10 115362503 to 115362528 25 - TSS region transcription start site region 99329
Tssr95811 10 115362551 to 115362570 19 + TSS region transcription start site region 95811
Tssr95812 10 115362574 to 115362592 18 + TSS region transcription start site region 95812
Thap2 10 115369966 to 115384435 14469 - protein coding gene THAP domain containing, apoptosis associated protein 2
Gm46180 10 115375104 to 115376345 1241 - lncRNA gene predicted gene, 46180
Tssr95813 10 115383917 to 115383950 33 + TSS region transcription start site region 95813
Cpgi2206 10 115384035 to 115386007 1972 CpG island CpG island 2206
Tssr99330 10 115384326 to 115384336 10 - TSS region transcription start site region 99330
Tssr99331 10 115384337 to 115384375 38 - TSS region transcription start site region 99331
Tssr99332 10 115384388 to 115384435 47 - TSS region transcription start site region 99332
Tssr99333 10 115384476 to 115384509 33 - TSS region transcription start site region 99333
Tssr99334 10 115384516 to 115384562 46 - TSS region transcription start site region 99334
Tssr99335 10 115384751 to 115384796 45 - TSS region transcription start site region 99335
Tssr95814 10 115384921 to 115384949 28 + TSS region transcription start site region 95814
Tssr95815 10 115384951 to 115385021 70 + TSS region transcription start site region 95815
Zfc3h1 10 115384959 to 115432772 47813 + protein coding gene zinc finger, C3H1-type containing
Tssr95816 10 115385045 to 115385057 12 + TSS region transcription start site region 95816
Tssr95817 10 115388929 to 115388937 8 + TSS region transcription start site region 95817
Tssr95818 10 115393492 to 115393499 7 + TSS region transcription start site region 95818
A130012E19Rik 10 115394750 to 115397884 3134 + unclassified gene RIKEN cDNA A130012E19 gene
Tssr95819 10 115401261 to 115401268 7 + TSS region transcription start site region 95819
Tssr95820 10 115408862 to 115408874 12 + TSS region transcription start site region 95820
Tssr95821 10 115411386 to 115411392 6 + TSS region transcription start site region 95821
Tssr95822 10 115422333 to 115422338 5 + TSS region transcription start site region 95822
Tssr95823 10 115427319 to 115427332 13 + TSS region transcription start site region 95823
Tssr95824 10 115430881 to 115430905 24 + TSS region transcription start site region 95824
Tssr95825 10 115430906 to 115430921 15 + TSS region transcription start site region 95825
Tssr95826 10 115430937 to 115430946 9 + TSS region transcription start site region 95826
Tssr95827 10 115431069 to 115431081 12 + TSS region transcription start site region 95827
Lgr5 10 115450314 to 115587780 137466 - protein coding gene leucine rich repeat containing G protein coupled receptor 5
Tssr95828 10 115452583 to 115452588 5 + TSS region transcription start site region 95828
Cpgi2207 10 115452715 to 115453054 339 CpG island CpG island 2207
Tssr99336 10 115505646 to 115505661 15 - TSS region transcription start site region 99336
Tssr3359 10 115556867 to 115556874 7 + TSS region transcription start site region 3359
Tssr99337 10 115569746 to 115569750 4 - TSS region transcription start site region 99337
A930009A15Rik 10 115569986 to 115582448 12462 + protein coding gene RIKEN cDNA A930009A15 gene
Tssr95829 10 115570009 to 115570035 26 + TSS region transcription start site region 95829
Tssr95830 10 115570041 to 115570055 14 + TSS region transcription start site region 95830
Cpgi2208 10 115586905 to 115588040 1135 CpG island CpG island 2208
Tssr99338 10 115587739 to 115587768 29 - TSS region transcription start site region 99338
Gm8960 10 115598984 to 115599788 804 - pseudogene predicted gene 8960
Cpgi2209 10 115664540 to 115664772 232 CpG island CpG island 2209