Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:11427495-12227625

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epm2a 10 11343445 to 11457477 114032 + protein coding gene epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
Cpgi1299 10 11491974 to 11492189 215 CpG island CpG island 1299
Tssr96702 10 11492001 to 11492013 12 - TSS region transcription start site region 96702
Tssr96703 10 11492109 to 11492126 17 - TSS region transcription start site region 96703
Tssr92364 10 11492125 to 11492146 21 + TSS region transcription start site region 92364
Tssr96704 10 11492174 to 11492178 4 - TSS region transcription start site region 96704
Gm48679 10 11505296 to 11505933 637 + pseudogene predicted gene, 48679
Gm48680 10 11580086 to 11587244 7158 + lincRNA gene predicted gene, 48680
Gm9797 10 11609223 to 11609835 612 + pseudogene predicted pseudogene 9797
Tssr92365 10 11609256 to 11609269 13 + TSS region transcription start site region 92365
Xiaf3 10 11642896 to 53772211 42129315 heritable phenotypic marker X inactivation autosomal factor 3
D10Mit80 10 11642896 to 11643049 153 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 80
Gm22546 10 11648005 to 11648134 129 + snoRNA gene predicted gene, 22546
D10Mit79 10 11800265 to 11800463 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 79
Gm48697 10 11824413 to 11841931 17518 - lincRNA gene predicted gene, 48697
D10Mit154 10 11827495 to 11827625 130 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 154
Gm48698 10 11838623 to 11838895 272 - pseudogene predicted gene, 48698
Tssr96705 10 11869254 to 11869300 46 - TSS region transcription start site region 96705
Gm22194 10 11940973 to 11941067 94 + miRNA gene predicted gene, 22194
Gm25011 10 11959880 to 11960005 125 + snoRNA gene predicted gene, 25011
D10Mit153 10 11962879 to 11963028 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 153
Gm48721 10 12002790 to 12009771 6981 - lincRNA gene predicted gene, 48721
Gm48722 10 12020860 to 12031440 10580 - lincRNA gene predicted gene, 48722
Gm40601 10 12058648 to 12088407 29759 + lncRNA gene predicted gene, 40601
D10Mit152 10 12183301 to 12183450 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 152
D10Mit182 10 12197717 to 12197865 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 182