Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:113626196-115136325

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40810 10 113730050 to 113730302 252 - pseudogene predicted gene, 40810
Gm47538 10 113731749 to 113732183 434 + pseudogene predicted gene, 47538
D10Mit294 10 113781251 to 113781453 202 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 294
Gm38333 10 113996647 to 113997250 603 + unclassified gene predicted gene, 38333
Gm48104 10 114095727 to 114098357 2630 + unclassified gene predicted gene, 48104
Gm31058 10 114112124 to 114119213 7089 + lncRNA gene predicted gene, 31058
D10Mit310 10 114177642 to 114177780 138 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-310
Tssr3357 10 114301984 to 114301987 3 - TSS region transcription start site region 3357
Gm38281 10 114350474 to 114350788 314 + unclassified gene predicted gene, 38281
Mvb4 10 114381196 to 114381325 129 QTL modifier of vibrator 4
Mvb2 10 114381196 to 114381325 129 QTL modifier of vibrator 2
D10Mit233 10 114381196 to 114381325 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 233
Vtbt10 10 114381196 to 114381325 129 QTL vertebral trabecular bone trait 10
Bmd25 10 114381196 to 114381325 129 QTL bone mineral density 25
Eae34 10 114381325 to 21532255 -92849070 QTL experimental allergic encephalomyelitis susceptibility 34
Trhde 10 114398821 to 114801370 402549 - protein coding gene TRH-degrading enzyme
Tssr99299 10 114419523 to 114419525 2 - TSS region transcription start site region 99299
Recrq11 10 114500000 to 123800000 9300000 QTL recombination rate in male meiosis QTL 11
Tssr99300 10 114516791 to 114516793 2 - TSS region transcription start site region 99300
D10Mit165 10 114618767 to 114619072 305 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 165
D10Mit276 10 114624283 to 114624516 233 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-276
V125Dq9 10 114700000 to 114700000 0 QTL vitamin D active form serum level QTL 9
Tssr95802 10 114737266 to 114737274 8 + TSS region transcription start site region 95802
Gm40766 10 114743356 to 114761839 18483 - lncRNA gene predicted gene, 40766
4930473D10Rik 10 114757747 to 114785104 27357 + antisense lncRNA gene RIKEN cDNA 4930473D10 gene
Tssr95803 10 114757761 to 114757789 28 + TSS region transcription start site region 95803
Cpgi2202 10 114800428 to 114802661 2233 CpG island CpG island 2202
Tssr99301 10 114802235 to 114802245 10 - TSS region transcription start site region 99301
Tssr99302 10 114802262 to 114802282 20 - TSS region transcription start site region 99302
Tssr99303 10 114802298 to 114802322 24 - TSS region transcription start site region 99303
Gm15723 10 114803519 to 114817587 14068 + antisense lncRNA gene predicted gene 15723
Gm40767 10 114828611 to 114917101 88490 - lncRNA gene predicted gene, 40767
D10Dcr11 10 114843593 to 114843688 95 DNA segment DNA Segment, Chr 10, Derry C. Roopenian 11
Gm31182 10 114875888 to 114882522 6634 + lincRNA gene predicted gene, 31182
Gm25319 10 114910711 to 114911035 324 - unclassified non-coding RNA gene predicted gene, 25319
D10Mit136 10 114922739 to 114922883 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 136
T2dm1sa 10 114922739 to 114922883 144 QTL type 2 diabetes mellitus 1 in SMXA RI mice
Gm31267 10 114947892 to 114952007 4115 + lincRNA gene predicted gene, 31267
D10Mit121 10 114984922 to 114985120 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 121
Gm22070 10 114991541 to 114991647 106 + snRNA gene predicted gene, 22070
D10Mit266 10 115002991 to 115003084 93 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 266
Tph2 10 115078641 to 115185022 106381 - protein coding gene tryptophan hydroxylase 2