Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:11294223-11924835

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo30 10 11281330 to 11297969 16639 + protein coding gene F-box protein 30
Tssr92361 10 11323419 to 11323424 5 + TSS region transcription start site region 92361
Gm48666 10 11330137 to 11330415 278 - pseudogene predicted gene, 48666
Gm25979 10 11330489 to 11330626 137 - snoRNA gene predicted gene, 25979
Cpgi1298 10 11343105 to 11344046 941 CpG island CpG island 1298
Tssr92362 10 11343387 to 11343506 119 + TSS region transcription start site region 92362
Epm2a 10 11343445 to 11457477 114032 + protein coding gene epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
Tssr92363 10 11356123 to 11356128 5 + TSS region transcription start site region 92363
Rpl17-ps11 10 11386881 to 11387604 723 - pseudogene ribosomal protein L17, pseudogene 11
Cpgi1299 10 11491974 to 11492189 215 CpG island CpG island 1299
Tssr96702 10 11492001 to 11492013 12 - TSS region transcription start site region 96702
Tssr96703 10 11492109 to 11492126 17 - TSS region transcription start site region 96703
Tssr92364 10 11492125 to 11492146 21 + TSS region transcription start site region 92364
Tssr96704 10 11492174 to 11492178 4 - TSS region transcription start site region 96704
Gm48679 10 11505296 to 11505933 637 + pseudogene predicted gene, 48679
Gm48680 10 11580086 to 11587244 7158 + lincRNA gene predicted gene, 48680
Gm9797 10 11609223 to 11609835 612 + pseudogene predicted pseudogene 9797
Tssr92365 10 11609256 to 11609269 13 + TSS region transcription start site region 92365
D10Mit80 10 11642896 to 11643049 153 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 80
Xiaf3 10 11642896 to 53772211 42129315 heritable phenotypic marker X inactivation autosomal factor 3
Gm22546 10 11648005 to 11648134 129 + snoRNA gene predicted gene, 22546
D10Mit79 10 11800265 to 11800463 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 79
Gm48697 10 11824413 to 11841931 17518 - lincRNA gene predicted gene, 48697
D10Mit154 10 11827495 to 11827625 130 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 154
Gm48698 10 11838623 to 11838895 272 - pseudogene predicted gene, 48698
Tssr96705 10 11869254 to 11869300 46 - TSS region transcription start site region 96705