Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:11264254-12474300

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930432B10Rik 10 11244790 to 11281221 36431 - bidirectional promoter lncRNA gene RIKEN cDNA 4930432B10 gene
Tssr96700 10 11280360 to 11280361 1 - TSS region transcription start site region 96700
Cpgi1297 10 11280533 to 11282123 1590 CpG island CpG island 1297
Tssr92353 10 11281025 to 11281041 16 + TSS region transcription start site region 92353
Tssr96701 10 11281191 to 11281248 57 - TSS region transcription start site region 96701
Tssr92354 10 11281304 to 11281357 53 + TSS region transcription start site region 92354
Fbxo30 10 11281330 to 11297969 16639 + protein coding gene F-box protein 30
Tssr92355 10 11281360 to 11281383 23 + TSS region transcription start site region 92355
Tssr92356 10 11281553 to 11281560 7 + TSS region transcription start site region 92356
Tssr92357 10 11281583 to 11281620 37 + TSS region transcription start site region 92357
Tssr92358 10 11283214 to 11283218 4 + TSS region transcription start site region 92358
Tssr92359 10 11285004 to 11285008 4 + TSS region transcription start site region 92359
Tssr92360 10 11286234 to 11286237 3 + TSS region transcription start site region 92360
Tssr92361 10 11323419 to 11323424 5 + TSS region transcription start site region 92361
Gm48666 10 11330137 to 11330415 278 - pseudogene predicted gene, 48666
Gm25979 10 11330489 to 11330626 137 - snoRNA gene predicted gene, 25979
Cpgi1298 10 11343105 to 11344046 941 CpG island CpG island 1298
Tssr92362 10 11343387 to 11343506 119 + TSS region transcription start site region 92362
Epm2a 10 11343445 to 11457477 114032 + protein coding gene epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
Tssr92363 10 11356123 to 11356128 5 + TSS region transcription start site region 92363
Rpl17-ps11 10 11386881 to 11387604 723 - pseudogene ribosomal protein L17, pseudogene 11
Cpgi1299 10 11491974 to 11492189 215 CpG island CpG island 1299
Tssr96702 10 11492001 to 11492013 12 - TSS region transcription start site region 96702
Tssr96703 10 11492109 to 11492126 17 - TSS region transcription start site region 96703
Tssr92364 10 11492125 to 11492146 21 + TSS region transcription start site region 92364
Tssr96704 10 11492174 to 11492178 4 - TSS region transcription start site region 96704
Gm48679 10 11505296 to 11505933 637 + pseudogene predicted gene, 48679
Gm48680 10 11580086 to 11587244 7158 + lincRNA gene predicted gene, 48680
Gm9797 10 11609223 to 11609835 612 + pseudogene predicted pseudogene 9797
Tssr92365 10 11609256 to 11609269 13 + TSS region transcription start site region 92365
Xiaf3 10 11642896 to 53772211 42129315 heritable phenotypic marker X inactivation autosomal factor 3
D10Mit80 10 11642896 to 11643049 153 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 80
Gm22546 10 11648005 to 11648134 129 + snoRNA gene predicted gene, 22546
D10Mit79 10 11800265 to 11800463 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 79
Gm48697 10 11824413 to 11841931 17518 - lincRNA gene predicted gene, 48697
D10Mit154 10 11827495 to 11827625 130 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 154
Gm48698 10 11838623 to 11838895 272 - pseudogene predicted gene, 48698
Tssr96705 10 11869254 to 11869300 46 - TSS region transcription start site region 96705
Gm22194 10 11940973 to 11941067 94 + miRNA gene predicted gene, 22194
Gm25011 10 11959880 to 11960005 125 + snoRNA gene predicted gene, 25011
D10Mit153 10 11962879 to 11963028 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 153
Gm48721 10 12002790 to 12009771 6981 - lincRNA gene predicted gene, 48721
Gm48722 10 12020860 to 12031440 10580 - lincRNA gene predicted gene, 48722
Gm40601 10 12058648 to 12088407 29759 + lncRNA gene predicted gene, 40601
D10Mit152 10 12183301 to 12183450 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 152
D10Mit182 10 12197717 to 12197865 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 182
Gm48723 10 12323421 to 12324661 1240 - lincRNA gene predicted gene, 48723
Gm48724 10 12324822 to 12329224 4402 - lincRNA gene predicted gene, 48724
Gm23680 10 12363410 to 12363573 163 + snRNA gene predicted gene, 23680
Gm25139 10 12368623 to 12368832 209 + snoRNA gene predicted gene, 25139
Utrn 10 12382188 to 12869365 487177 - protein coding gene utrophin
Tssr96706 10 12383864 to 12383868 4 - TSS region transcription start site region 96706
Tssr96707 10 12406852 to 12406856 4 - TSS region transcription start site region 96707
Gm48798 10 12420804 to 12421596 792 - unclassified gene predicted gene, 48798
Tssr96708 10 12445282 to 12445285 3 - TSS region transcription start site region 96708