Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:111271719-111909273

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Osbpl8 10 111164752 to 111297249 132497 + protein coding gene oxysterol binding protein-like 8
Tssr95733 10 111273121 to 111273139 18 + TSS region transcription start site region 95733
Tssr95734 10 111273886 to 111273912 26 + TSS region transcription start site region 95734
Tssr95735 10 111278298 to 111278302 4 + TSS region transcription start site region 95735
Tssr95736 10 111278722 to 111278763 41 + TSS region transcription start site region 95736
Tssr95737 10 111280311 to 111280332 21 + TSS region transcription start site region 95737
Tssr95738 10 111280342 to 111280358 16 + TSS region transcription start site region 95738
Tssr95739 10 111282135 to 111282146 11 + TSS region transcription start site region 95739
Tssr95740 10 111282149 to 111282174 25 + TSS region transcription start site region 95740
Tssr95741 10 111284335 to 111284354 19 + TSS region transcription start site region 95741
Tssr95742 10 111284379 to 111284401 22 + TSS region transcription start site region 95742
Tssr95743 10 111286108 to 111286142 34 + TSS region transcription start site region 95743
Tssr95744 10 111289836 to 111289855 19 + TSS region transcription start site region 95744
Tssr95745 10 111291521 to 111291546 25 + TSS region transcription start site region 95745
Tssr95746 10 111293270 to 111293281 11 + TSS region transcription start site region 95746
Tssr95747 10 111293593 to 111293614 21 + TSS region transcription start site region 95747
Tssr95748 10 111293618 to 111293632 14 + TSS region transcription start site region 95748
Tssr95749 10 111293648 to 111293674 26 + TSS region transcription start site region 95749
Tssr95750 10 111295054 to 111295062 8 + TSS region transcription start site region 95750
Tssr95751 10 111295117 to 111295123 6 + TSS region transcription start site region 95751
Tssr95752 10 111296057 to 111296064 7 + TSS region transcription start site region 95752
Tssr95753 10 111296202 to 111296210 8 + TSS region transcription start site region 95753
Tssr95754 10 111296302 to 111296314 12 + TSS region transcription start site region 95754
Tssr95755 10 111296432 to 111296450 18 + TSS region transcription start site region 95755
Tssr95756 10 111296815 to 111296838 23 + TSS region transcription start site region 95756
Cpgi2192 10 111298312 to 111298962 650 CpG island CpG island 2192
Bbs10 10 111298679 to 111301727 3048 + protein coding gene Bardet-Biedl syndrome 10 (human)
Tssr95757 10 111298682 to 111298689 7 + TSS region transcription start site region 95757
Tssr95758 10 111298699 to 111298721 22 + TSS region transcription start site region 95758
Gm40760 10 111303436 to 111314070 10634 + lncRNA gene predicted gene, 40760
Gm30095 10 111312790 to 111314345 1555 - lncRNA gene predicted gene, 30095
Cpgi2193 10 111336107 to 111336309 202 CpG island CpG island 2193
Gm40761 10 111337124 to 111347185 10061 + lincRNA gene predicted gene, 40761
Gm30145 10 111366704 to 111378465 11761 - lncRNA gene predicted gene, 30145
Cpgi2194 10 111472748 to 111473939 1191 CpG island CpG island 2194
Tssr95759 10 111473186 to 111473201 15 + TSS region transcription start site region 95759
Tssr95760 10 111473220 to 111473242 22 + TSS region transcription start site region 95760
Nap1l1 10 111473223 to 111498150 24927 + protein coding gene nucleosome assembly protein 1-like 1
Tssr95761 10 111473253 to 111473262 9 + TSS region transcription start site region 95761
Tssr3351 10 111473266 to 111473267 1 + TSS region transcription start site region 3351
Tssr95762 10 111473962 to 111473966 4 + TSS region transcription start site region 95762
Gm25117 10 111481493 to 111481636 143 + snoRNA gene predicted gene, 25117
D10Ertd284e 10 111484291 to 111484499 208 DNA segment DNA segment, Chr 10, ERATO Doi 284, expressed
Tssr95763 10 111485347 to 111485358 11 + TSS region transcription start site region 95763
Gm5176 10 111500788 to 111501345 557 + pseudogene predicted gene 5176
Cpgi2195 10 111506017 to 111507867 1850 CpG island CpG island 2195
Phlda1 10 111506286 to 111508645 2359 + protein coding gene pleckstrin homology like domain, family A, member 1
Tssr95764 10 111506395 to 111506419 24 + TSS region transcription start site region 95764
Tssr95765 10 111506428 to 111506435 7 + TSS region transcription start site region 95765
Tssr95766 10 111506542 to 111506563 21 + TSS region transcription start site region 95766
Gm28592 10 111506575 to 111507662 1087 - lincRNA gene predicted gene 28592
Tssr95767 10 111506939 to 111506962 23 + TSS region transcription start site region 95767
Tssr99267 10 111507316 to 111507338 22 - TSS region transcription start site region 99267
Tssr99268 10 111507373 to 111507397 24 - TSS region transcription start site region 99268
Tssr99269 10 111516962 to 111516982 20 - TSS region transcription start site region 99269
Gm40762 10 111524069 to 111529990 5921 - lncRNA gene predicted gene, 40762
Tssr95768 10 111553991 to 111554025 34 + TSS region transcription start site region 95768
Gm30193 10 111569880 to 111573862 3982 - lncRNA gene predicted gene, 30193
4933440J02Rik 10 111586719 to 111594273 7554 - lincRNA gene RIKEN cDNA 4933440J02 gene
Tssr95769 10 111595077 to 111595092 15 + TSS region transcription start site region 95769
Tssr95770 10 111595873 to 111595880 7 + TSS region transcription start site region 95770
Tssr95771 10 111595892 to 111595905 13 + TSS region transcription start site region 95771
Tssr95772 10 111595908 to 111595918 10 + TSS region transcription start site region 95772
Tssr95773 10 111595923 to 111595935 12 + TSS region transcription start site region 95773
Tssr95774 10 111595958 to 111595971 13 + TSS region transcription start site region 95774
Gm30262 10 111599177 to 111611338 12161 + lincRNA gene predicted gene, 30262
Tssr95775 10 111608603 to 111608635 32 + TSS region transcription start site region 95775
Gm40763 10 111631429 to 111636499 5070 - lncRNA gene predicted gene, 40763
Gm47864 10 111648378 to 111649812 1434 - pseudogene predicted gene, 47864
Gm30624 10 111685035 to 111731355 46320 + lincRNA gene predicted gene, 30624
Tssr95776 10 111725128 to 111725133 5 + TSS region transcription start site region 95776
Hylaq3 10 111732321 to 118150744 6418423 QTL Hyperlocomotor activity related QTL 3
D10Mit73 10 111732321 to 111732414 93 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 73
Tmevp2 10 111732414 to 92894079 -18838335 QTL Theiler's murine encephalomyelitis virus persistence 2
Tssr3352 10 111754034 to 111754037 3 - TSS region transcription start site region 3352
Gm47865 10 111757258 to 111799853 42595 - lincRNA gene predicted gene, 47865
Gm46193 10 111767778 to 111768141 363 + pseudogene predicted gene, 46193
Cpgi2196 10 111782491 to 111782742 251 CpG island CpG island 2196
Tssr99270 10 111799786 to 111799806 20 - TSS region transcription start site region 99270
Tssr99271 10 111799858 to 111799881 23 - TSS region transcription start site region 99271
Gm19005 10 111806388 to 111807229 841 - pseudogene predicted gene, 19005
Gm37189 10 111810780 to 111811077 297 + unclassified gene predicted gene, 37189
Gm47866 10 111829325 to 111829944 619 - pseudogene predicted gene, 47866
Gm20758 10 111854521 to 111874376 19855 - lincRNA gene predicted gene, 20758
Gm47880 10 111889014 to 111889818 804 + pseudogene predicted gene, 47880