Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:110980347-111990358

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151 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zdhhc17 10 110941779 to 111010066 68287 - protein coding gene zinc finger, DHHC domain containing 17
Cpgi2188 10 111009159 to 111010530 1371 CpG island CpG island 2188
Tssr99259 10 111009979 to 111009984 5 - TSS region transcription start site region 99259
Tssr99260 10 111010001 to 111010025 24 - TSS region transcription start site region 99260
Tssr99261 10 111010266 to 111010273 7 - TSS region transcription start site region 99261
Tssr3350 10 111010286 to 111010289 3 - TSS region transcription start site region 3350
Gm29916 10 111074142 to 111083558 9416 - lncRNA gene predicted gene, 29916
Gm48851 10 111101578 to 111102871 1293 - pseudogene predicted gene, 48851
Cpgi2189 10 111103121 to 111103296 175 CpG island CpG island 2189
Rpl6l 10 111125851 to 111126721 870 + pseudogene ribosomal protein L6-like
Gm22101 10 111129107 to 111129209 102 - snRNA gene predicted gene, 22101
Tssr99262 10 111131891 to 111131893 2 - TSS region transcription start site region 99262
Tssr99263 10 111134641 to 111134651 10 - TSS region transcription start site region 99263
Gm8873 10 111156397 to 111157533 1136 + pseudogene predicted gene 8873
Cpgi2190 10 111156408 to 111156764 356 CpG island CpG island 2190
Tssr99264 10 111157353 to 111157392 39 - TSS region transcription start site region 99264
Tssr95695 10 111160470 to 111160494 24 + TSS region transcription start site region 95695
Cpgi2191 10 111164379 to 111165798 1419 CpG island CpG island 2191
Tssr99265 10 111164630 to 111164678 48 - TSS region transcription start site region 99265
Osbpl8 10 111164752 to 111297249 132497 + protein coding gene oxysterol binding protein-like 8
Tssr95696 10 111164755 to 111164778 23 + TSS region transcription start site region 95696
Tssr95697 10 111164794 to 111164811 17 + TSS region transcription start site region 95697
Tssr95698 10 111164822 to 111164868 46 + TSS region transcription start site region 95698
Tssr95699 10 111164869 to 111164882 13 + TSS region transcription start site region 95699
Tssr95700 10 111164887 to 111164898 11 + TSS region transcription start site region 95700
Tssr95701 10 111165763 to 111165777 14 + TSS region transcription start site region 95701
Tssr95702 10 111167195 to 111167210 15 + TSS region transcription start site region 95702
Tssr95703 10 111167591 to 111167620 29 + TSS region transcription start site region 95703
Tssr99266 10 111171379 to 111171382 3 - TSS region transcription start site region 99266
D10Mit143 10 111173518 to 111173758 240 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 143
Tssr95704 10 111174273 to 111174314 41 + TSS region transcription start site region 95704
D10Ertd709e 10 111174588 to 111174836 248 DNA segment DNA segment, Chr 10, ERATO Doi 709, expressed
Tssr95705 10 111174801 to 111174820 19 + TSS region transcription start site region 95705
Tssr95706 10 111174873 to 111174887 14 + TSS region transcription start site region 95706
Tssr95707 10 111176441 to 111176446 5 + TSS region transcription start site region 95707
Tssr95708 10 111176970 to 111177013 43 + TSS region transcription start site region 95708
Tssr95709 10 111178428 to 111178442 14 + TSS region transcription start site region 95709
Tssr95710 10 111178490 to 111178512 22 + TSS region transcription start site region 95710
Gm17849 10 111179952 to 111180793 841 + pseudogene predicted gene, 17849
Tssr95711 10 111186690 to 111186715 25 + TSS region transcription start site region 95711
Tssr95712 10 111190315 to 111190324 9 + TSS region transcription start site region 95712
Tssr95713 10 111190375 to 111190395 20 + TSS region transcription start site region 95713
Tssr95714 10 111204836 to 111204846 10 + TSS region transcription start site region 95714
Tssr95715 10 111211563 to 111211606 43 + TSS region transcription start site region 95715
Tssr95716 10 111226880 to 111226887 7 + TSS region transcription start site region 95716
Tssr95717 10 111226891 to 111226898 7 + TSS region transcription start site region 95717
Tssr95718 10 111229385 to 111229417 32 + TSS region transcription start site region 95718
Tssr95719 10 111229440 to 111229465 25 + TSS region transcription start site region 95719
Tssr95720 10 111232165 to 111232177 12 + TSS region transcription start site region 95720
Tssr95721 10 111232403 to 111232414 11 + TSS region transcription start site region 95721
Tssr95722 10 111232420 to 111232456 36 + TSS region transcription start site region 95722
Tssr95723 10 111233540 to 111233556 16 + TSS region transcription start site region 95723
Tssr95724 10 111233703 to 111233716 13 + TSS region transcription start site region 95724
Tssr95725 10 111239406 to 111239429 23 + TSS region transcription start site region 95725
Tssr95726 10 111244292 to 111244324 32 + TSS region transcription start site region 95726
Tssr95727 10 111247832 to 111247850 18 + TSS region transcription start site region 95727
Tssr95728 10 111247856 to 111247892 36 + TSS region transcription start site region 95728
Tssr95729 10 111253595 to 111253609 14 + TSS region transcription start site region 95729
Tssr95730 10 111254212 to 111254217 5 + TSS region transcription start site region 95730
Tssr95731 10 111260142 to 111260148 6 + TSS region transcription start site region 95731
Tssr95732 10 111270560 to 111270589 29 + TSS region transcription start site region 95732
Tssr95733 10 111273121 to 111273139 18 + TSS region transcription start site region 95733
Tssr95734 10 111273886 to 111273912 26 + TSS region transcription start site region 95734
Tssr95735 10 111278298 to 111278302 4 + TSS region transcription start site region 95735
Tssr95736 10 111278722 to 111278763 41 + TSS region transcription start site region 95736
Tssr95737 10 111280311 to 111280332 21 + TSS region transcription start site region 95737
Tssr95738 10 111280342 to 111280358 16 + TSS region transcription start site region 95738
Tssr95739 10 111282135 to 111282146 11 + TSS region transcription start site region 95739
Tssr95740 10 111282149 to 111282174 25 + TSS region transcription start site region 95740
Tssr95741 10 111284335 to 111284354 19 + TSS region transcription start site region 95741
Tssr95742 10 111284379 to 111284401 22 + TSS region transcription start site region 95742
Tssr95743 10 111286108 to 111286142 34 + TSS region transcription start site region 95743
Tssr95744 10 111289836 to 111289855 19 + TSS region transcription start site region 95744
Tssr95745 10 111291521 to 111291546 25 + TSS region transcription start site region 95745
Tssr95746 10 111293270 to 111293281 11 + TSS region transcription start site region 95746
Tssr95747 10 111293593 to 111293614 21 + TSS region transcription start site region 95747
Tssr95748 10 111293618 to 111293632 14 + TSS region transcription start site region 95748
Tssr95749 10 111293648 to 111293674 26 + TSS region transcription start site region 95749
Tssr95750 10 111295054 to 111295062 8 + TSS region transcription start site region 95750
Tssr95751 10 111295117 to 111295123 6 + TSS region transcription start site region 95751
Tssr95752 10 111296057 to 111296064 7 + TSS region transcription start site region 95752
Tssr95753 10 111296202 to 111296210 8 + TSS region transcription start site region 95753
Tssr95754 10 111296302 to 111296314 12 + TSS region transcription start site region 95754
Tssr95755 10 111296432 to 111296450 18 + TSS region transcription start site region 95755
Tssr95756 10 111296815 to 111296838 23 + TSS region transcription start site region 95756
Cpgi2192 10 111298312 to 111298962 650 CpG island CpG island 2192
Bbs10 10 111298679 to 111301727 3048 + protein coding gene Bardet-Biedl syndrome 10 (human)
Tssr95757 10 111298682 to 111298689 7 + TSS region transcription start site region 95757
Tssr95758 10 111298699 to 111298721 22 + TSS region transcription start site region 95758
Gm40760 10 111303436 to 111314070 10634 + lncRNA gene predicted gene, 40760
Gm30095 10 111312790 to 111314345 1555 - lncRNA gene predicted gene, 30095
Cpgi2193 10 111336107 to 111336309 202 CpG island CpG island 2193
Gm40761 10 111337124 to 111347185 10061 + lincRNA gene predicted gene, 40761
Gm30145 10 111366704 to 111378465 11761 - lncRNA gene predicted gene, 30145
Cpgi2194 10 111472748 to 111473939 1191 CpG island CpG island 2194
Tssr95759 10 111473186 to 111473201 15 + TSS region transcription start site region 95759
Tssr95760 10 111473220 to 111473242 22 + TSS region transcription start site region 95760
Nap1l1 10 111473223 to 111498150 24927 + protein coding gene nucleosome assembly protein 1-like 1
Tssr95761 10 111473253 to 111473262 9 + TSS region transcription start site region 95761
Tssr3351 10 111473266 to 111473267 1 + TSS region transcription start site region 3351
Tssr95762 10 111473962 to 111473966 4 + TSS region transcription start site region 95762
Gm25117 10 111481493 to 111481636 143 + snoRNA gene predicted gene, 25117
D10Ertd284e 10 111484291 to 111484499 208 DNA segment DNA segment, Chr 10, ERATO Doi 284, expressed
Tssr95763 10 111485347 to 111485358 11 + TSS region transcription start site region 95763
Gm5176 10 111500788 to 111501345 557 + pseudogene predicted gene 5176
Cpgi2195 10 111506017 to 111507867 1850 CpG island CpG island 2195
Phlda1 10 111506286 to 111508645 2359 + protein coding gene pleckstrin homology like domain, family A, member 1
Tssr95764 10 111506395 to 111506419 24 + TSS region transcription start site region 95764
Tssr95765 10 111506428 to 111506435 7 + TSS region transcription start site region 95765
Tssr95766 10 111506542 to 111506563 21 + TSS region transcription start site region 95766
Gm28592 10 111506575 to 111507662 1087 - lincRNA gene predicted gene 28592
Tssr95767 10 111506939 to 111506962 23 + TSS region transcription start site region 95767
Tssr99267 10 111507316 to 111507338 22 - TSS region transcription start site region 99267
Tssr99268 10 111507373 to 111507397 24 - TSS region transcription start site region 99268
Tssr99269 10 111516962 to 111516982 20 - TSS region transcription start site region 99269
Gm40762 10 111524069 to 111529990 5921 - lncRNA gene predicted gene, 40762
Tssr95768 10 111553991 to 111554025 34 + TSS region transcription start site region 95768
Gm30193 10 111569880 to 111573862 3982 - lncRNA gene predicted gene, 30193
4933440J02Rik 10 111586719 to 111594273 7554 - lincRNA gene RIKEN cDNA 4933440J02 gene
Tssr95769 10 111595077 to 111595092 15 + TSS region transcription start site region 95769
Tssr95770 10 111595873 to 111595880 7 + TSS region transcription start site region 95770
Tssr95771 10 111595892 to 111595905 13 + TSS region transcription start site region 95771
Tssr95772 10 111595908 to 111595918 10 + TSS region transcription start site region 95772
Tssr95773 10 111595923 to 111595935 12 + TSS region transcription start site region 95773
Tssr95774 10 111595958 to 111595971 13 + TSS region transcription start site region 95774
Gm30262 10 111599177 to 111611338 12161 + lincRNA gene predicted gene, 30262
Tssr95775 10 111608603 to 111608635 32 + TSS region transcription start site region 95775
Gm40763 10 111631429 to 111636499 5070 - lncRNA gene predicted gene, 40763
Gm47864 10 111648378 to 111649812 1434 - pseudogene predicted gene, 47864
Gm30624 10 111685035 to 111731355 46320 + lincRNA gene predicted gene, 30624
Tssr95776 10 111725128 to 111725133 5 + TSS region transcription start site region 95776
Hylaq3 10 111732321 to 118150744 6418423 QTL Hyperlocomotor activity related QTL 3
D10Mit73 10 111732321 to 111732414 93 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 73
Tmevp2 10 111732414 to 92894079 -18838335 QTL Theiler's murine encephalomyelitis virus persistence 2
Tssr3352 10 111754034 to 111754037 3 - TSS region transcription start site region 3352
Gm47865 10 111757258 to 111799853 42595 - lincRNA gene predicted gene, 47865
Gm46193 10 111767778 to 111768141 363 + pseudogene predicted gene, 46193
Cpgi2196 10 111782491 to 111782742 251 CpG island CpG island 2196
Tssr99270 10 111799786 to 111799806 20 - TSS region transcription start site region 99270
Tssr99271 10 111799858 to 111799881 23 - TSS region transcription start site region 99271
Gm19005 10 111806388 to 111807229 841 - pseudogene predicted gene, 19005
Gm37189 10 111810780 to 111811077 297 + unclassified gene predicted gene, 37189
Gm47866 10 111829325 to 111829944 619 - pseudogene predicted gene, 47866
Gm20758 10 111854521 to 111874376 19855 - lincRNA gene predicted gene, 20758
Gm47880 10 111889014 to 111889818 804 + pseudogene predicted gene, 47880
Cpgi2197 10 111972562 to 111973307 745 CpG island CpG island 2197
Krr1 10 111972695 to 111988430 15735 + protein coding gene KRR1, small subunit (SSU) processome component, homolog (yeast)
Tssr95777 10 111972750 to 111972805 55 + TSS region transcription start site region 95777
Tssr95778 10 111984829 to 111984847 18 + TSS region transcription start site region 95778
Glipr1 10 111985448 to 112002621 17173 - protein coding gene GLI pathogenesis-related 1 (glioma)
Tssr95779 10 111985456 to 111985463 7 + TSS region transcription start site region 95779