Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:109248911-110558927

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr3347 10 109309452 to 109309455 3 - TSS region transcription start site region 3347
Gm44495 10 109326769 to 109326851 82 - miRNA gene predicted gene, 44495
Gm23041 10 109368088 to 109368193 105 - snRNA gene predicted gene, 23041
Gm47329 10 109386267 to 109386487 220 - pseudogene predicted gene, 47329
D10Mit203 10 109415238 to 109415381 143 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 203
Gm40757 10 109597698 to 109642136 44438 + lncRNA gene predicted gene, 40757
Tssr99231 10 109638849 to 109638853 4 - TSS region transcription start site region 99231
Tssr3348 10 109642451 to 109642456 5 + TSS region transcription start site region 3348
3110043J17Rik 10 109648779 to 109649538 759 + unclassified gene RIKEN cDNA 3110043J17 gene
Nav3 10 109681573 to 110455897 774324 - protein coding gene neuron navigator 3
Cpgi2180 10 109684502 to 109684658 156 CpG island CpG island 2180
Cpgi2181 10 109767120 to 109767306 186 CpG island CpG island 2181
Tssr99232 10 109780080 to 109780083 3 - TSS region transcription start site region 99232
Tssr99233 10 109790172 to 109790185 13 - TSS region transcription start site region 99233
Tssr99234 10 109833195 to 109833220 25 - TSS region transcription start site region 99234
Tssr99235 10 109883738 to 109883782 44 - TSS region transcription start site region 99235
Tssr99236 10 109903814 to 109903829 15 - TSS region transcription start site region 99236
Tssr99237 10 109903830 to 109903845 15 - TSS region transcription start site region 99237
Tssr99238 10 109903852 to 109903871 19 - TSS region transcription start site region 99238
Tssr99239 10 109903875 to 109903900 25 - TSS region transcription start site region 99239
Tssr99240 10 109903911 to 109903927 16 - TSS region transcription start site region 99240
Tssr99241 10 109903952 to 109903966 14 - TSS region transcription start site region 99241
Tssr99242 10 109904012 to 109904022 10 - TSS region transcription start site region 99242
Tssr99243 10 109986532 to 109986581 49 - TSS region transcription start site region 99243
Tssr99244 10 110000902 to 110000913 11 - TSS region transcription start site region 99244
Tssr99245 10 110000934 to 110000943 9 - TSS region transcription start site region 99245
Gm3871 10 110003891 to 110013355 9464 unclassified gene predicted gene 3871
Gm36935 10 110037488 to 110037779 291 - unclassified gene predicted gene, 36935
Gm47337 10 110078691 to 110080967 2276 + unclassified gene predicted gene, 47337
Tssr99246 10 110084540 to 110084545 5 - TSS region transcription start site region 99246
Tssr99247 10 110098315 to 110098327 12 - TSS region transcription start site region 99247
Gm47339 10 110099819 to 110102904 3085 + unclassified gene predicted gene, 47339
Tssr99248 10 110126889 to 110126895 6 - TSS region transcription start site region 99248
Gm47340 10 110139739 to 110140169 430 - pseudogene predicted gene, 47340
A830061P03Rik 10 110140706 to 110144178 3472 unclassified gene RIKEN cDNA A830061P03 gene
Tssr99249 10 110149585 to 110149615 30 - TSS region transcription start site region 99249
Tssr99250 10 110152268 to 110152273 5 - TSS region transcription start site region 99250
Tssr99251 10 110337101 to 110337104 3 - TSS region transcription start site region 99251
Cpgi2182 10 110347983 to 110348141 158 CpG island CpG island 2182
Gm47338 10 110379508 to 110381661 2153 + unclassified gene predicted gene, 47338
Gm3877 10 110454687 to 110456212 1525 unclassified gene predicted gene 3877
Cpgi2183 10 110455068 to 110456442 1374 CpG island CpG island 2183
Tssr3349 10 110455914 to 110455921 7 - TSS region transcription start site region 3349
Tssr99252 10 110455921 to 110456008 87 - TSS region transcription start site region 99252
Tssr99253 10 110456197 to 110456213 16 - TSS region transcription start site region 99253
Tssr99254 10 110456214 to 110456244 30 - TSS region transcription start site region 99254
Gm47055 10 110480637 to 110481077 440 + pseudogene predicted gene, 47055
D10Mit150 10 110523231 to 110523344 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 150