Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:108853357-109056488

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Syt1	10	108497650 to 109010978	513328	-	protein coding gene	synaptotagmin I
Tssr99219	10	108879746 to 108879751	5	-	TSS region	transcription start site region 99219
Tssr99220	10	108879772 to 108879783	11	-	TSS region	transcription start site region 99220
Tssr99221	10	108894894 to 108894905	11	-	TSS region	transcription start site region 99221
Tssr99222	10	108902252 to 108902265	13	-	TSS region	transcription start site region 99222
A130086K04Rik	10	108917235 to 108921548	4313		unclassified gene	RIKEN cDNA A130086K04 gene
6430709C05Rik	10	108932616 to 108934149	1533		unclassified gene	RIKEN cDNA 6430709C05 gene
Gm47477	10	108953357 to 108956488	3131	-	unclassified gene	predicted gene, 47477
Tssr99223	10	109009055 to 109009105	50	-	TSS region	transcription start site region 99223
Cpgi2178	10	109010389 to 109010994	605		CpG island	CpG island 2178
Tssr99224	10	109010608 to 109010619	11	-	TSS region	transcription start site region 99224
Tssr99225	10	109010621 to 109010685	64	-	TSS region	transcription start site region 99225
Tssr99226	10	109010690 to 109010723	33	-	TSS region	transcription start site region 99226
Tssr99227	10	109010735 to 109010746	11	-	TSS region	transcription start site region 99227
Tssr99228	10	109010860 to 109010918	58	-	TSS region	transcription start site region 99228
Tssr99229	10	109010922 to 109010952	30	-	TSS region	transcription start site region 99229
Tssr99230	10	109010955 to 109010983	28	-	TSS region	transcription start site region 99230
Cpgi2179	10	109011479 to 109011788	309		CpG island	CpG island 2179