Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:106187686-107077698

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps15a-ps1 10 106192378 to 106192770 392 - pseudogene ribosomal protein S15A, pseudogene 1
Tssr99181 10 106192799 to 106192801 2 - TSS region transcription start site region 99181
Gm48379 10 106358324 to 106358654 330 + pseudogene predicted gene, 48379
D10Mit292 10 106372705 to 106372829 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 292
Gm48380 10 106444397 to 106445102 705 + pseudogene predicted gene, 48380
C230021G24Rik 10 106466939 to 106470768 3829 - lincRNA gene RIKEN cDNA C230021G24 gene
Cpgi2169 10 106469384 to 106469832 448 CpG island CpG island 2169
Cpgi2170 10 106470004 to 106470528 524 CpG island CpG island 2170
Ppfia2 10 106470270 to 106933468 463198 + protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Tssr95624 10 106470281 to 106470367 86 + TSS region transcription start site region 95624
Tssr95625 10 106496866 to 106496870 4 + TSS region transcription start site region 95625
Olfr1556-ps1 10 106502737 to 106503202 465 + pseudogene olfactory receptor 1556, pseudogene 1
4930532I03Rik 10 106555195 to 106602480 47285 - antisense lncRNA gene RIKEN cDNA 4930532I03 gene
Tssr95626 10 106615780 to 106615795 15 + TSS region transcription start site region 95626
Tssr95627 10 106632398 to 106632442 44 + TSS region transcription start site region 95627
Tssr95628 10 106632686 to 106632698 12 + TSS region transcription start site region 95628
Tssr95629 10 106632751 to 106632813 62 + TSS region transcription start site region 95629
Tssr95630 10 106638389 to 106638417 28 + TSS region transcription start site region 95630
Tssr95631 10 106675813 to 106675814 1 + TSS region transcription start site region 95631
Tssr3344 10 106723611 to 106723613 2 + TSS region transcription start site region 3344
Gm17848 10 106753812 to 106754906 1094 - pseudogene predicted gene, 17848
Tssr95632 10 106879005 to 106879012 7 + TSS region transcription start site region 95632
Tssr95633 10 106879293 to 106879305 12 + TSS region transcription start site region 95633
Tssr95634 10 106879340 to 106879353 13 + TSS region transcription start site region 95634
Tssr95635 10 106879388 to 106879395 7 + TSS region transcription start site region 95635
Tssr95636 10 106879417 to 106879429 12 + TSS region transcription start site region 95636
Tssr95637 10 106879815 to 106879832 17 + TSS region transcription start site region 95637
Tssr95638 10 106879871 to 106879901 30 + TSS region transcription start site region 95638
Tssr95639 10 106879957 to 106879968 11 + TSS region transcription start site region 95639
Tssr95640 10 106879994 to 106880006 12 + TSS region transcription start site region 95640
B230114P17Rik 10 106933516 to 106935951 2435 unclassified gene RIKEN cDNA B230114P17 gene
Acss3 10 106936164 to 107123664 187500 - protein coding gene acyl-CoA synthetase short-chain family member 3
Tssr95641 10 106949202 to 106949208 6 + TSS region transcription start site region 95641
Gm19007 10 106949297 to 106950170 873 + pseudogene predicted gene, 19007
E030002G19Rik 10 107039691 to 107043188 3497 unclassified gene RIKEN cDNA E030002G19 gene
Gm18040 10 107058523 to 107059349 826 - pseudogene predicted gene, 18040
Gm19181 10 107061044 to 107061983 939 - pseudogene predicted gene, 19181