Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:105717799-106667801

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mettl25 10 105763189 to 105841380 78191 - protein coding gene methyltransferase like 25
Cpgi2167 10 105799630 to 105799795 165 CpG island CpG island 2167
n-R5s80 10 105804087 to 105804197 110 - rRNA gene nuclear encoded rRNA 5S 80
Gm48298 10 105806538 to 105808867 2329 - unclassified gene predicted gene, 48298
Cpgi2168 10 105840871 to 105841920 1049 CpG island CpG island 2168
Tssr95619 10 105841064 to 105841132 68 + TSS region transcription start site region 95619
Tssr99179 10 105841323 to 105841372 49 - TSS region transcription start site region 99179
Tssr95620 10 105841421 to 105841436 15 + TSS region transcription start site region 95620
Tssr95621 10 105841454 to 105841512 58 + TSS region transcription start site region 95621
Ccdc59 10 105841479 to 105847510 6031 + protein coding gene coiled-coil domain containing 59
Tssr95622 10 105842802 to 105842816 14 + TSS region transcription start site region 95622
Gm24237 10 105929612 to 105929743 131 - snoRNA gene predicted gene, 24237
Tgq20 10 106000595 to 106000595 0 QTL triglyceride QTL 20
Tssr99180 10 106007464 to 106007473 9 - TSS region transcription start site region 99180
D10Nds2 10 106017432 to 106017575 143 DNA segment DNA segment, Chr 10, Nuffield Department of Surgery 2
Gm25342 10 106055958 to 106056079 121 - snoRNA gene predicted gene, 25342
Gm8796 10 106065857 to 106066789 932 + pseudogene predicted gene 8796
Gm48363 10 106074227 to 106079076 4849 + unclassified gene predicted gene, 48363
Tssr95623 10 106141206 to 106141210 4 + TSS region transcription start site region 95623
Gm48376 10 106166777 to 106169259 2482 - pseudogene predicted gene, 48376
Gm48377 10 106183021 to 106183891 870 + unclassified gene predicted gene, 48377
Rps15a-ps1 10 106192378 to 106192770 392 - pseudogene ribosomal protein S15A, pseudogene 1
Tssr99181 10 106192799 to 106192801 2 - TSS region transcription start site region 99181
Gm48379 10 106358324 to 106358654 330 + pseudogene predicted gene, 48379
D10Mit292 10 106372705 to 106372829 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 292
Gm48380 10 106444397 to 106445102 705 + pseudogene predicted gene, 48380
C230021G24Rik 10 106466939 to 106470768 3829 - lincRNA gene RIKEN cDNA C230021G24 gene
Cpgi2169 10 106469384 to 106469832 448 CpG island CpG island 2169
Cpgi2170 10 106470004 to 106470528 524 CpG island CpG island 2170
Ppfia2 10 106470270 to 106933468 463198 + protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Tssr95624 10 106470281 to 106470367 86 + TSS region transcription start site region 95624
Tssr95625 10 106496866 to 106496870 4 + TSS region transcription start site region 95625
Olfr1556-ps1 10 106502737 to 106503202 465 + pseudogene olfactory receptor 1556, pseudogene 1
4930532I03Rik 10 106555195 to 106602480 47285 - antisense lncRNA gene RIKEN cDNA 4930532I03 gene
Tssr95626 10 106615780 to 106615795 15 + TSS region transcription start site region 95626
Tssr95627 10 106632398 to 106632442 44 + TSS region transcription start site region 95627
Tssr95628 10 106632686 to 106632698 12 + TSS region transcription start site region 95628
Tssr95629 10 106632751 to 106632813 62 + TSS region transcription start site region 95629
Tssr95630 10 106638389 to 106638417 28 + TSS region transcription start site region 95630