Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:105446064-106236132

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmtc2 10 105187663 to 105574451 386788 - protein coding gene transmembrane and tetratricopeptide repeat containing 2
Gm46241 10 105440855 to 105452530 11675 - lncRNA gene predicted gene, 46241
Tssr99166 10 105456226 to 105456235 9 - TSS region transcription start site region 99166
Tssr99167 10 105459449 to 105459484 35 - TSS region transcription start site region 99167
Tssr99168 10 105474138 to 105474143 5 - TSS region transcription start site region 99168
Gm15666 10 105506113 to 105507034 921 - pseudogene predicted gene 15666
Gm48204 10 105514681 to 105516649 1968 - unclassified gene predicted gene, 48204
Gm15664 10 105520460 to 105520643 183 + pseudogene predicted gene 15664
Tssr99169 10 105521766 to 105521795 29 - TSS region transcription start site region 99169
Tssr99170 10 105522004 to 105522017 13 - TSS region transcription start site region 99170
4930588G05Rik 10 105524039 to 105526359 2320 unclassified gene RIKEN cDNA 4930588G05 gene
Tssr99171 10 105532577 to 105532581 4 - TSS region transcription start site region 99171
Gm48207 10 105532984 to 105534493 1509 - unclassified gene predicted gene, 48207
D10Mit135 10 105542935 to 105543081 146 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 135
Tssr99172 10 105558945 to 105558963 18 - TSS region transcription start site region 99172
Tssr99173 10 105568252 to 105568256 4 - TSS region transcription start site region 99173
Tssr95616 10 105573156 to 105573167 11 + TSS region transcription start site region 95616
Tssr95617 10 105573274 to 105573277 3 + TSS region transcription start site region 95617
Cpgi2166 10 105573391 to 105575336 1945 CpG island CpG island 2166
Tssr99174 10 105574168 to 105574243 75 - TSS region transcription start site region 99174
Tssr3343 10 105574381 to 105574382 1 - TSS region transcription start site region 3343
Tssr99175 10 105574389 to 105574407 18 - TSS region transcription start site region 99175
Tssr99176 10 105574421 to 105574433 12 - TSS region transcription start site region 99176
Tssr99177 10 105574436 to 105574451 15 - TSS region transcription start site region 99177
Tssr99178 10 105574466 to 105574469 3 - TSS region transcription start site region 99178
Tssr95618 10 105574538 to 105574566 28 + TSS region transcription start site region 95618
Gm15663 10 105574551 to 105583870 9319 + lncRNA gene predicted gene 15663
Mettl25 10 105763189 to 105841380 78191 - protein coding gene methyltransferase like 25
Cpgi2167 10 105799630 to 105799795 165 CpG island CpG island 2167
n-R5s80 10 105804087 to 105804197 110 - rRNA gene nuclear encoded rRNA 5S 80
Gm48298 10 105806538 to 105808867 2329 - unclassified gene predicted gene, 48298
Cpgi2168 10 105840871 to 105841920 1049 CpG island CpG island 2168
Tssr95619 10 105841064 to 105841132 68 + TSS region transcription start site region 95619
Tssr99179 10 105841323 to 105841372 49 - TSS region transcription start site region 99179
Tssr95620 10 105841421 to 105841436 15 + TSS region transcription start site region 95620
Tssr95621 10 105841454 to 105841512 58 + TSS region transcription start site region 95621
Ccdc59 10 105841479 to 105847510 6031 + protein coding gene coiled-coil domain containing 59
Tssr95622 10 105842802 to 105842816 14 + TSS region transcription start site region 95622
Gm24237 10 105929612 to 105929743 131 - snoRNA gene predicted gene, 24237
Tgq20 10 106000595 to 106000595 0 QTL triglyceride QTL 20
Tssr99180 10 106007464 to 106007473 9 - TSS region transcription start site region 99180
D10Nds2 10 106017432 to 106017575 143 DNA segment DNA segment, Chr 10, Nuffield Department of Surgery 2
Gm25342 10 106055958 to 106056079 121 - snoRNA gene predicted gene, 25342
Gm8796 10 106065857 to 106066789 932 + pseudogene predicted gene 8796
Gm48363 10 106074227 to 106079076 4849 + unclassified gene predicted gene, 48363
Tssr95623 10 106141206 to 106141210 4 + TSS region transcription start site region 95623
Gm48376 10 106166777 to 106169259 2482 - pseudogene predicted gene, 48376
Gm48377 10 106183021 to 106183891 870 + unclassified gene predicted gene, 48377
Rps15a-ps1 10 106192378 to 106192770 392 - pseudogene ribosomal protein S15A, pseudogene 1
Tssr99181 10 106192799 to 106192801 2 - TSS region transcription start site region 99181