Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:104505263-105575292

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D10Mit134 10 104611721 to 104611820 99 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 134
Tssr95611 10 104659647 to 104659650 3 + TSS region transcription start site region 95611
Tssr95612 10 104746952 to 104746956 4 + TSS region transcription start site region 95612
Gm25522 10 104865204 to 104865308 104 - snRNA gene predicted gene, 25522
Gm48184 10 104874212 to 104874484 272 - pseudogene predicted gene, 48184
Gm40751 10 104926487 to 104936593 10106 - lncRNA gene predicted gene, 40751
Tssr3342 10 104941103 to 104941110 7 + TSS region transcription start site region 3342
Tssr95613 10 105040263 to 105040292 29 + TSS region transcription start site region 95613
Gm25587 10 105040273 to 105040438 165 + snRNA gene predicted gene, 25587
Gm40752 10 105040286 to 105043809 3523 - lncRNA gene predicted gene, 40752
Gm40753 10 105102823 to 105105804 2981 - lncRNA gene predicted gene, 40753
Gm25422 10 105140207 to 105140335 128 - snoRNA gene predicted gene, 25422
Gm36997 10 105142236 to 105142942 706 - unclassified gene predicted gene, 36997
Tmtc2 10 105187663 to 105574451 386788 - protein coding gene transmembrane and tetratricopeptide repeat containing 2
Tssr99161 10 105195986 to 105195990 4 - TSS region transcription start site region 99161
Tssr95614 10 105238123 to 105238157 34 + TSS region transcription start site region 95614
Tssr95615 10 105238488 to 105238516 28 + TSS region transcription start site region 95615
Skl4 10 105252393 to 105252530 137 QTL skeletal size (tail length) 4
D10Mit133 10 105252393 to 105252530 137 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 133
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Tssr99162 10 105296545 to 105296549 4 - TSS region transcription start site region 99162
Tssr99163 10 105314043 to 105314047 4 - TSS region transcription start site region 99163
Tssr99164 10 105315686 to 105315693 7 - TSS region transcription start site region 99164
Tssr99165 10 105315702 to 105315709 7 - TSS region transcription start site region 99165
Gm48206 10 105340249 to 105342314 2065 + unclassified gene predicted gene, 48206
Gm48205 10 105377340 to 105377476 136 - unclassified gene predicted gene, 48205
Gm48203 10 105392502 to 105394286 1784 - unclassified gene predicted gene, 48203
Gm46241 10 105440855 to 105452530 11675 - lncRNA gene predicted gene, 46241
Tssr99166 10 105456226 to 105456235 9 - TSS region transcription start site region 99166
Tssr99167 10 105459449 to 105459484 35 - TSS region transcription start site region 99167
Tssr99168 10 105474138 to 105474143 5 - TSS region transcription start site region 99168
Gm15666 10 105506113 to 105507034 921 - pseudogene predicted gene 15666
Gm48204 10 105514681 to 105516649 1968 - unclassified gene predicted gene, 48204
Gm15664 10 105520460 to 105520643 183 + pseudogene predicted gene 15664
Tssr99169 10 105521766 to 105521795 29 - TSS region transcription start site region 99169
Tssr99170 10 105522004 to 105522017 13 - TSS region transcription start site region 99170
4930588G05Rik 10 105524039 to 105526359 2320 unclassified gene RIKEN cDNA 4930588G05 gene
Tssr99171 10 105532577 to 105532581 4 - TSS region transcription start site region 99171
Gm48207 10 105532984 to 105534493 1509 - unclassified gene predicted gene, 48207
D10Mit135 10 105542935 to 105543081 146 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 135
Tssr99172 10 105558945 to 105558963 18 - TSS region transcription start site region 99172
Tssr99173 10 105568252 to 105568256 4 - TSS region transcription start site region 99173
Tssr95616 10 105573156 to 105573167 11 + TSS region transcription start site region 95616
Tssr95617 10 105573274 to 105573277 3 + TSS region transcription start site region 95617
Cpgi2166 10 105573391 to 105575336 1945 CpG island CpG island 2166
Tssr99174 10 105574168 to 105574243 75 - TSS region transcription start site region 99174
Tssr3343 10 105574381 to 105574382 1 - TSS region transcription start site region 3343
Tssr99175 10 105574389 to 105574407 18 - TSS region transcription start site region 99175
Tssr99176 10 105574421 to 105574433 12 - TSS region transcription start site region 99176
Tssr99177 10 105574436 to 105574451 15 - TSS region transcription start site region 99177
Tssr99178 10 105574466 to 105574469 3 - TSS region transcription start site region 99178
Tssr95618 10 105574538 to 105574566 28 + TSS region transcription start site region 95618
Gm15663 10 105574551 to 105583870 9319 + lncRNA gene predicted gene 15663