Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:10361334-11511574

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgb 10 10335703 to 10472326 136623 - protein coding gene androglobin
D10Mit312 10 10390607 to 10390729 122 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-312
Gm48326 10 10465414 to 10465534 120 - pseudogene predicted gene, 48326
Tssr96689 10 10472393 to 10472405 12 - TSS region transcription start site region 96689
Tssr96690 10 10475033 to 10475053 20 - TSS region transcription start site region 96690
Tssr96691 10 10475067 to 10475083 16 - TSS region transcription start site region 96691
D10Mit245 10 10516079 to 10516177 98 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 245
Rab32 10 10545039 to 10558207 13168 - protein coding gene RAB32, member RAS oncogene family
Cpgi1291 10 10557671 to 10558345 674 CpG island CpG island 1291
Tssr96692 10 10558096 to 10558125 29 - TSS region transcription start site region 96692
Tssr96693 10 10558131 to 10558190 59 - TSS region transcription start site region 96693
Tssr96694 10 10558199 to 10558250 51 - TSS region transcription start site region 96694
Gm5177 10 10605945 to 10616313 10368 + pseudogene predicted pseudogene 5177
Gm23601 10 10663154 to 10663284 130 + snoRNA gene predicted gene, 23601
Gm10944 10 10681348 to 10681858 510 + protein coding gene predicted gene 10944
Grm1 10 10686059 to 11082356 396297 - protein coding gene glutamate receptor, metabotropic 1
Tssr96695 10 10688943 to 10688956 13 - TSS region transcription start site region 96695
Cpgi1292 10 10689018 to 10689682 664 CpG island CpG island 1292
Gm48400 10 10730629 to 10731126 497 + pseudogene predicted gene, 48400
Tssr92347 10 10748965 to 10748974 9 + TSS region transcription start site region 92347
4930567K20Rik 10 10751046 to 10758131 7085 + antisense lncRNA gene RIKEN cDNA 4930567K20 gene
Tssr92348 10 10751073 to 10751112 39 + TSS region transcription start site region 92348
Tssr92349 10 10751120 to 10751130 10 + TSS region transcription start site region 92349
Cpgi1293 10 10936334 to 10936574 240 CpG island CpG island 1293
Gm48406 10 11035916 to 11036144 228 + pseudogene predicted gene, 48406
Tssr96696 10 11045585 to 11045596 11 - TSS region transcription start site region 96696
Cpgi1294 10 11080228 to 11080854 626 CpG island CpG island 1294
Tssr96697 10 11080987 to 11081023 36 - TSS region transcription start site region 96697
Tssr96698 10 11081092 to 11081132 40 - TSS region transcription start site region 96698
Cpgi1295 10 11081577 to 11081954 377 CpG island CpG island 1295
Tssr96699 10 11082287 to 11082372 85 - TSS region transcription start site region 96699
Cpgi1296 10 11149164 to 11150084 920 CpG island CpG island 1296
Tssr92350 10 11149387 to 11149400 13 + TSS region transcription start site region 92350
Tssr92351 10 11149406 to 11149417 11 + TSS region transcription start site region 92351
Shprh 10 11149427 to 11217595 68168 + protein coding gene SNF2 histone linker PHD RING helicase
Tssr92352 10 11149449 to 11149513 64 + TSS region transcription start site region 92352
Gm16577 10 11212280 to 11212979 699 - antisense lncRNA gene predicted gene 16577
4930432B10Rik 10 11244790 to 11281221 36431 - bidirectional promoter lncRNA gene RIKEN cDNA 4930432B10 gene
Tssr96700 10 11280360 to 11280361 1 - TSS region transcription start site region 96700
Cpgi1297 10 11280533 to 11282123 1590 CpG island CpG island 1297
Tssr92353 10 11281025 to 11281041 16 + TSS region transcription start site region 92353
Tssr96701 10 11281191 to 11281248 57 - TSS region transcription start site region 96701
Tssr92354 10 11281304 to 11281357 53 + TSS region transcription start site region 92354
Fbxo30 10 11281330 to 11297969 16639 + protein coding gene F-box protein 30
Tssr92355 10 11281360 to 11281383 23 + TSS region transcription start site region 92355
Tssr92356 10 11281553 to 11281560 7 + TSS region transcription start site region 92356
Tssr92357 10 11281583 to 11281620 37 + TSS region transcription start site region 92357
Tssr92358 10 11283214 to 11283218 4 + TSS region transcription start site region 92358
Tssr92359 10 11285004 to 11285008 4 + TSS region transcription start site region 92359
Tssr92360 10 11286234 to 11286237 3 + TSS region transcription start site region 92360
Tssr92361 10 11323419 to 11323424 5 + TSS region transcription start site region 92361
Gm48666 10 11330137 to 11330415 278 - pseudogene predicted gene, 48666
Gm25979 10 11330489 to 11330626 137 - snoRNA gene predicted gene, 25979
Cpgi1298 10 11343105 to 11344046 941 CpG island CpG island 1298
Tssr92362 10 11343387 to 11343506 119 + TSS region transcription start site region 92362
Epm2a 10 11343445 to 11457477 114032 + protein coding gene epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
Tssr92363 10 11356123 to 11356128 5 + TSS region transcription start site region 92363
Rpl17-ps11 10 11386881 to 11387604 723 - pseudogene ribosomal protein L17, pseudogene 11
Cpgi1299 10 11491974 to 11492189 215 CpG island CpG island 1299
Tssr96702 10 11492001 to 11492013 12 - TSS region transcription start site region 96702
Tssr96703 10 11492109 to 11492126 17 - TSS region transcription start site region 96703
Tssr92364 10 11492125 to 11492146 21 + TSS region transcription start site region 92364
Tssr96704 10 11492174 to 11492178 4 - TSS region transcription start site region 96704
Gm48679 10 11505296 to 11505933 637 + pseudogene predicted gene, 48679