Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:103110533-105263000

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrriq1 10 103046031 to 103236322 190291 - protein coding gene leucine-rich repeats and IQ motif containing 1
Gm25376 10 103121236 to 103121368 132 + snoRNA gene predicted gene, 25376
Tssr99154 10 103144921 to 103144930 9 - TSS region transcription start site region 99154
Tssr99155 10 103144968 to 103144979 11 - TSS region transcription start site region 99155
Tssr99156 10 103145477 to 103145492 15 - TSS region transcription start site region 99156
Gm47164 10 103207748 to 103213437 5689 - unclassified gene predicted gene, 47164
Cpgi2164 10 103236111 to 103236433 322 CpG island CpG island 2164
Tssr99157 10 103236280 to 103236327 47 - TSS region transcription start site region 99157
Tssr99158 10 103236345 to 103236354 9 - TSS region transcription start site region 99158
Tssr95602 10 103334553 to 103334586 33 + TSS region transcription start site region 95602
Tssr95603 10 103347095 to 103347106 11 + TSS region transcription start site region 95603
6430590A10Rik 10 103367189 to 103369365 2176 - lncRNA gene RIKEN cDNA 6430590A10 gene
Cpgi2165 10 103367448 to 103368965 1517 CpG island CpG island 2165
Tssr95604 10 103367652 to 103367669 17 + TSS region transcription start site region 95604
Tssr95605 10 103367692 to 103367747 55 + TSS region transcription start site region 95605
Tssr95606 10 103367748 to 103367836 88 + TSS region transcription start site region 95606
Slc6a15 10 103367783 to 103419377 51594 + protein coding gene solute carrier family 6 (neurotransmitter transporter), member 15
Tssr99159 10 103369062 to 103369069 7 - TSS region transcription start site region 99159
Tssr95607 10 103369327 to 103369346 19 + TSS region transcription start site region 95607
Tssr95608 10 103369376 to 103369381 5 + TSS region transcription start site region 95608
Gm8768 10 103429910 to 103430735 825 + pseudogene predicted gene 8768
Gm47223 10 103507362 to 103566565 59203 + lincRNA gene predicted gene, 47223
Gm47221 10 103512928 to 103571685 58757 + lincRNA gene predicted gene, 47221
Gm47220 10 103567646 to 103568051 405 + pseudogene predicted gene, 47220
Gm47222 10 103569209 to 103569401 192 - pseudogene predicted gene, 47222
Gm26923 10 103581398 to 103582393 995 - pseudogene predicted gene, 26923
Gm47224 10 103856267 to 103858332 2065 - lincRNA gene predicted gene, 47224
D10Mit293 10 103876129 to 103876278 149 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 293
D10Mit122 10 103877747 to 103877895 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 122
Sluc22 10 103877747 to 103877895 148 QTL susceptibility to lung cancer 22
Ednrbm1 10 103877895 to 92291521 -11586374 QTL endothelin receptor type B modifier 1
Gm47225 10 103893538 to 103893806 268 + pseudogene predicted gene, 47225
Gm25143 10 103959543 to 103959651 108 + snRNA gene predicted gene, 25143
Gm47226 10 103986993 to 103987906 913 + lincRNA gene predicted gene, 47226
Insq4 10 104073224 to 104073368 144 QTL insulin QTL 4
D10Mit70 10 104073224 to 104073368 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 70
Uvbi1 10 104073224 to 104073368 144 QTL UVB induced immunosuppression 1
Gm47227 10 104082225 to 104082341 116 + pseudogene predicted gene, 47227
Gm47228 10 104096323 to 104096761 438 - pseudogene predicted gene, 47228
Tssr99160 10 104127359 to 104127361 2 - TSS region transcription start site region 99160
Gm21293 10 104142987 to 104145427 2440 + protein coding gene predicted gene, 21293
Gm6763 10 104151497 to 104153936 2439 + protein coding gene predicted gene 6763
Gm8764 10 104160006 to 104162444 2438 + protein coding gene predicted gene 8764
Gm21304 10 104168515 to 104170954 2439 + protein coding gene predicted gene, 21304
Gm21312 10 104177024 to 104179491 2467 + protein coding gene predicted gene, 21312
Gm20765 10 104185533 to 104188000 2467 + protein coding gene predicted gene, 20765
Gm4340 10 104194042 to 104196522 2480 + protein coding gene predicted gene 4340
Gm22339 10 104224838 to 104224899 61 - snRNA gene predicted gene, 22339
Tssr95609 10 104267539 to 104267546 7 + TSS region transcription start site region 95609
Mir6411 10 104287269 to 104287376 107 + miRNA gene microRNA 6411
Tssr95610 10 104422568 to 104422570 2 + TSS region transcription start site region 95610
Gm22945 10 104471051 to 104471207 156 - snRNA gene predicted gene, 22945
D10Mit134 10 104611721 to 104611820 99 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 134
Tssr95611 10 104659647 to 104659650 3 + TSS region transcription start site region 95611
Tssr95612 10 104746952 to 104746956 4 + TSS region transcription start site region 95612
Gm25522 10 104865204 to 104865308 104 - snRNA gene predicted gene, 25522
Gm48184 10 104874212 to 104874484 272 - pseudogene predicted gene, 48184
Gm40751 10 104926487 to 104936593 10106 - lncRNA gene predicted gene, 40751
Tssr3342 10 104941103 to 104941110 7 + TSS region transcription start site region 3342
Tssr95613 10 105040263 to 105040292 29 + TSS region transcription start site region 95613
Gm25587 10 105040273 to 105040438 165 + snRNA gene predicted gene, 25587
Gm40752 10 105040286 to 105043809 3523 - lncRNA gene predicted gene, 40752
Gm40753 10 105102823 to 105105804 2981 - lncRNA gene predicted gene, 40753
Gm25422 10 105140207 to 105140335 128 - snoRNA gene predicted gene, 25422
Gm36997 10 105142236 to 105142942 706 - unclassified gene predicted gene, 36997
Tmtc2 10 105187663 to 105574451 386788 - protein coding gene transmembrane and tetratricopeptide repeat containing 2
Tssr99161 10 105195986 to 105195990 4 - TSS region transcription start site region 99161
Tssr95614 10 105238123 to 105238157 34 + TSS region transcription start site region 95614
Tssr95615 10 105238488 to 105238516 28 + TSS region transcription start site region 95615
Ipng2 10 105252393 to 118661448 13409055 QTL imprinted postnatal growth 2
Skl4 10 105252393 to 105252530 137 QTL skeletal size (tail length) 4
D10Mit133 10 105252393 to 105252530 137 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 133