Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:99749987-100752508

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr8239 1 99772394 to 99772408 14 + TSS region transcription start site region 8239
Tssr8240 1 99772429 to 99772438 9 + TSS region transcription start site region 8240
Tssr8241 1 99790200 to 99790203 3 + TSS region transcription start site region 8241
Prdx2-ps1 1 99790429 to 99791025 596 - pseudogene peroxiredoxin 2, pseudogene 1
Tssr13112 1 99791090 to 99791102 12 - TSS region transcription start site region 13112
Tssr13113 1 99791821 to 99791843 22 - TSS region transcription start site region 13113
Gm37877 1 99847984 to 99850692 2708 + unclassified gene predicted gene, 37877
Alpq5 1 99904910 to 99904910 0 QTL alcohol preference QTL 5
Aath7 1 99904910 to 99904910 0 QTL aortic arch atherosclerosis 7
D1Mit85 1 99936667 to 99936802 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 85
D1Mit385 1 99965618 to 99965737 119 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 385
Gm19029 1 100006021 to 100006584 563 + pseudogene predicted gene, 19029
Tssr8242 1 100042783 to 100042784 1 + TSS region transcription start site region 8242
Tssr13114 1 100180147 to 100180185 38 - TSS region transcription start site region 13114
Tssr13115 1 100180207 to 100180245 38 - TSS region transcription start site region 13115
Tssr13116 1 100180262 to 100180308 46 - TSS region transcription start site region 13116
Tssr13117 1 100180377 to 100180388 11 - TSS region transcription start site region 13117
Gm41923 1 100249987 to 100252508 2521 - lncRNA gene predicted gene, 41923
Tssr13118 1 100252501 to 100252519 18 - TSS region transcription start site region 13118
Tssr8243 1 100252618 to 100252634 16 + TSS region transcription start site region 8243
Tssr8244 1 100252648 to 100252658 10 + TSS region transcription start site region 8244
Gm23602 1 100252917 to 100253048 131 - snoRNA gene predicted gene, 23602
Gm29668 1 100282329 to 100282643 314 - pseudogene predicted gene 29668
Gm29667 1 100282791 to 100283280 489 + pseudogene predicted gene 29667
D1Mit386 1 100400482 to 100400577 95 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 386
D1Mit186 1 100454342 to 100454625 283 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 186
Reb1 1 100485942 to 91540544 -8945398 QTL repetitive behavior 1
Cntnap5b 1 100485942 to 99772765 -713177 + protein coding gene contactin associated protein-like 5B
Gm18700 1 100597074 to 100597622 548 + pseudogene predicted gene, 18700
Gm18185 1 100643582 to 100644248 666 + pseudogene predicted gene, 18185
Gm29334 1 100653800 to 100654156 356 + pseudogene predicted gene 29334