MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:9893638-9957085

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14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sgk3	1	9798107 to 9900845	102738	+	protein coding gene	serum/glucocorticoid regulated kinase 3
Gm2352	1	9901944 to 9902558	614	+	pseudogene	predicted gene 2352
Mcmdc2	1	9908638 to 9942085	33447	+	protein coding gene	minichromosome maintenance domain containing 2
Tssr5921	1	9908654 to 9908669	15	+	TSS region	transcription start site region 5921
Tssr5922	1	9908679 to 9908686	7	+	TSS region	transcription start site region 5922
Tssr5923	1	9932092 to 9932107	15	+	TSS region	transcription start site region 5923
Snhg6	1	9942025 to 9944118	2093	-	lincRNA gene	small nucleolar RNA host gene 6
Tssr10945	1	9942155 to 9942167	12	-	TSS region	transcription start site region 10945
Snord87	1	9942470 to 9942543	73	-	snoRNA gene	small nucleolar RNA, C/D box 87
Tssr10946	1	9942537 to 9942550	13	-	TSS region	transcription start site region 10946
Tssr10947	1	9943590 to 9943608	18	-	TSS region	transcription start site region 10947
Cpgi29	1	9943688 to 9944485	797		CpG island	CpG island 29
Tssr10948	1	9944087 to 9944090	3	-	TSS region	transcription start site region 10948
Tssr10949	1	9944104 to 9944127	23	-	TSS region	transcription start site region 10949